data_6tzr_residue ############################ # Computer software used # ############################ save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 6tzr _Structure_validation_residue.Date_analyzed 2019-10-11 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 ecloud orig full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.51 -0.849 0 C3'-C2'-C1' 98.744 -2.826 . . . . 122.26 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 2' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C4'--C3' 1.516 -1.188 0 P-O5'-C5' 118.849 -1.282 . . . . 100.82 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 3' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.593 -1.174 0 C3'-C2'-C1' 100.05 -1.893 . . . . 80.2 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 4' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.561 -3.861 0 C2'-C3'-O3' 114.915 1.598 . . . . 82.68 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 5' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.588 -1.576 0 C3'-C2'-C1' 99.964 -1.954 . . . . 79.46 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 6' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.583 -1.982 0 N19-C1'-C2' 116.124 1.202 . . . . 87.0 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 7' ' ' BRU . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 8' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--OP2 1.497 0.701 0 C5'-C4'-C3' 117.103 1.602 . . . . 94.46 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 9' ' ' ' DC' . . . . . 0.425 ' N3 ' ' N3 ' ' B' ' 9' ' ' ' DC' . . . . . . . . 0 O4'--C1' 1.411 -0.68 0 P-O3'-C3' 121.211 1.259 . . . . 93.68 . . . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 10' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O3'--C3' 1.444 1.021 0 C2'-C3'-O3' 118.694 2.998 . . . . 103.03 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 11' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.618 0.913 0 P-O3'-C3' 123.16 2.883 . . . . 94.63 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' B' B ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O3'--C3' 1.44 0.675 0 C3'-C2'-C1' 104.839 1.528 . . . . 89.46 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' B' B ' 2' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 P--O5' 1.585 -0.763 0 O4'-C1'-C2' 107.517 1.288 . . . . 89.49 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' B' B ' 3' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.584 -1.886 0 P-O5'-C5' 118.483 -1.511 . . . . 94.53 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' B' B ' 4' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.406 -1.109 0 N19-C1'-C2' 116.378 1.361 . . . . 87.58 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' B' B ' 5' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C2'--C1' 1.509 -0.851 0 C3'-C2'-C1' 99.067 -2.595 . . . . 80.9 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' B' B ' 6' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.58 -2.265 0 C2'-C3'-O3' 105.24 -1.985 . . . . 84.0 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' B' B ' 7' ' ' BRU . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' B' B ' 8' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.584 -1.921 1 C2'-C3'-O3' 125.609 5.559 . . . . 107.16 . . . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' B' B ' 9' ' ' ' DC' . . . . . 0.425 ' N3 ' ' N3 ' ' A' ' 9' ' ' ' DC' . . . . . . . . 0 O5'--C5' 1.416 -1.505 0 P-O3'-C3' 123.419 3.099 . . . . 97.05 . . . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' B' B ' 10' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.587 -1.631 0 O5'-C5'-C4' 106.973 -2.305 . . . . 106.85 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' B' B ' 11' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.585 -1.81 0 C3'-C2'-C1' 100.02 -1.914 . . . . 118.86 . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 101' ' ' ' BA' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.51 -0.849 0 C3'-C2'-C1' 98.744 -2.826 . . . . 122.26000000000001 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 2' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C4'--C3' 1.516 -1.188 0 P-O5'-C5' 118.849 -1.282 . . . . 100.81999999999999 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 3' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.593 -1.174 0 C3'-C2'-C1' 100.05 -1.893 . . . . 80.200000000000003 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 4' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.561 -3.861 0 C2'-C3'-O3' 114.915 1.598 . . . . 82.680000000000007 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 5' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.588 -1.576 0 C3'-C2'-C1' 99.964 -1.954 . . . . 79.459999999999994 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 6' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.583 -1.982 0 N19-C1'-C2' 116.124 1.202 . . . . 87.0 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 7' ' ' BRU . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 8' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--OP2 1.497 0.701 0 C5'-C4'-C3' 117.103 1.602 . . . . 94.459999999999994 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 9' ' ' ' DC' . . . . . 0.425 ' N3 ' ' N3 ' ' B' ' 9' ' ' ' DC' . . . . . . . . 0 O4'--C1' 1.411 -0.68 0 P-O3'-C3' 121.211 1.259 . . . . 93.680000000000007 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 10' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O3'--C3' 1.444 1.021 0 C2'-C3'-O3' 118.694 2.998 . . . . 103.03 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 11' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.618 0.913 0 P-O3'-C3' 123.16 2.883 . . . . 94.629999999999995 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' B' B ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O3'--C3' 1.44 0.675 0 C3'-C2'-C1' 104.839 1.528 . . . . 89.459999999999994 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' B' B ' 2' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 P--O5' 1.585 -0.763 0 O4'-C1'-C2' 107.517 1.288 . . . . 89.489999999999995 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' B' B ' 3' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.584 -1.886 0 P-O5'-C5' 118.483 -1.511 . . . . 94.530000000000001 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' B' B ' 4' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.406 -1.109 0 N19-C1'-C2' 116.378 1.361 . . . . 87.579999999999998 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' B' B ' 5' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C2'--C1' 1.509 -0.851 0 C3'-C2'-C1' 99.067 -2.595 . . . . 80.900000000000006 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' B' B ' 6' ' ' ' DC' . . . . . 0.45 " H5'" ' C6 ' ' B' ' 6' ' ' ' DC' . . . . . . . . 0 P--O3' 1.58 -2.265 0 C2'-C3'-O3' 105.24 -1.985 . . . . 84.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' B' B ' 7' ' ' BRU . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' B' B ' 8' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.584 -1.921 1 C2'-C3'-O3' 125.609 5.559 . . . . 107.16 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' B' B ' 9' ' ' ' DC' . . . . . 0.425 ' N3 ' ' N3 ' ' A' ' 9' ' ' ' DC' . . . . . . . . 0 O5'--C5' 1.416 -1.505 0 P-O3'-C3' 123.419 3.099 . . . . 97.049999999999997 . . . . . . . . . . 1 1 . 1 . 001 ecloud build full ' B' B ' 10' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.587 -1.631 0 O5'-C5'-C4' 106.973 -2.305 . . . . 106.84999999999999 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' B' B ' 11' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.585 -1.81 0 C3'-C2'-C1' 100.02 -1.914 . . . . 118.86 . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 101' ' ' ' BA' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C3'--C2' 1.51 -0.849 0 C3'-C2'-C1' 98.744 -2.826 . . . . 122.26 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 2' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C4'--C3' 1.516 -1.188 0 P-O5'-C5' 118.849 -1.282 . . . . 100.82 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 3' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.593 -1.174 0 C3'-C2'-C1' 100.05 -1.893 . . . . 80.2 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 4' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.561 -3.861 0 C2'-C3'-O3' 114.915 1.598 . . . . 82.68 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 5' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.588 -1.576 0 C3'-C2'-C1' 99.964 -1.954 . . . . 79.46 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 6' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.583 -1.982 0 N19-C1'-C2' 116.124 1.202 . . . . 87.0 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 7' ' ' BRU . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 8' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--OP2 1.497 0.701 0 C5'-C4'-C3' 117.103 1.602 . . . . 94.46 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 9' ' ' ' DC' . . . . . 0.425 ' N3 ' ' N3 ' ' B' ' 9' ' ' ' DC' . . . . . . . . 0 O4'--C1' 1.411 -0.68 0 P-O3'-C3' 121.211 1.259 . . . . 93.68 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 10' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O3'--C3' 1.444 1.021 0 C2'-C3'-O3' 118.694 2.998 . . . . 103.03 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 11' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.618 0.913 0 P-O3'-C3' 123.16 2.883 . . . . 94.63 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' B' B ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 O3'--C3' 1.44 0.675 0 C3'-C2'-C1' 104.839 1.528 . . . . 89.46 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' B' B ' 2' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 P--O5' 1.585 -0.763 0 O4'-C1'-C2' 107.517 1.288 . . . . 89.49 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' B' B ' 3' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.584 -1.886 0 P-O5'-C5' 118.483 -1.511 . . . . 94.53 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' B' B ' 4' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.406 -1.109 0 N19-C1'-C2' 116.378 1.361 . . . . 87.58 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' B' B ' 5' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C2'--C1' 1.509 -0.851 0 C3'-C2'-C1' 99.067 -2.595 . . . . 80.9 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' B' B ' 6' ' ' ' DC' . . . . . 0.45 " H5'" ' C6 ' ' B' ' 6' ' ' ' DC' . . . . . . . . 0 P--O3' 1.58 -2.265 0 C2'-C3'-O3' 105.24 -1.985 . . . . 84.0 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' B' B ' 7' ' ' BRU . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' B' B ' 8' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.584 -1.921 1 C2'-C3'-O3' 125.609 5.559 . . . . 107.16 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' B' B ' 9' ' ' ' DC' . . . . . 0.425 ' N3 ' ' N3 ' ' A' ' 9' ' ' ' DC' . . . . . . . . 0 O5'--C5' 1.416 -1.505 0 P-O3'-C3' 123.419 3.099 . . . . 97.05 . . . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' B' B ' 10' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.587 -1.631 0 O5'-C5'-C4' 106.973 -2.305 . . . . 106.85 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' B' B ' 11' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O3' 1.585 -1.81 0 C3'-C2'-C1' 100.02 -1.914 . . . . 118.86 . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 101' ' ' ' BA' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 stop_ save_