data_6g8d_residue ############################ # Computer software used # ############################ save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 6g8d _Structure_validation_residue.Date_analyzed 2019-04-19 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 ecloud orig full ' A' A ' 1' ' ' LEU . . . . . . . . . . . . . 15.0 tp . . . . . 0 N--CA 1.506 2.338 0 CA-C-O 121.237 0.542 . . . . 34.69 111.831 . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 2' ' ' ASN . . . . . . . . . . . . . 36.5 m120 -118.67 127.81 53.92 Favored 'General case' 0 CA--C 1.471 -2.07 0 N-CA-C 107.968 -1.123 . . . . 31.77 107.968 174.772 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 3' ' ' ILE . . . . . . . . . . . . . 96.8 mt -127.68 125.39 65.19 Favored 'Isoleucine or valine' 0 N--CA 1.429 -1.495 0 O-C-N 124.848 1.343 . . . . 26.21 108.646 -175.805 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 4' ' ' TYR . . . . . . . . . . . . . 28.0 m-85 -121.3 115.79 23.63 Favored 'General case' 0 CA--C 1.464 -2.343 0 O-C-N 124.936 1.397 . . . . 23.42 108.52 179.796 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 5' ' ' GLN . . . . . . . . . . . . . 25.2 mt-30 -124.48 115.93 21.69 Favored 'General case' 0 C--O 1.195 -1.814 0 O-C-N 124.781 1.301 . . . . 36.27 113.096 -179.115 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 6' ' ' TYR . . . . . . . . . . . . . 75.5 m-85 . . . . . 0 N--CA 1.417 -2.117 0 N-CA-C 108.238 -1.023 . . . . 43.13 108.238 -179.278 . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 101' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 1' ' ' LEU . . . . . . . . . . . . . 15.0 tp . . . . . 0 N--CA 1.506 2.338 0 CA-C-O 121.237 0.542 . . . . 34.69 111.831 . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 2' ' ' ASN . . . . . . . . . . . . . 36.5 m120 -118.67 127.81 53.92 Favored 'General case' 0 CA--C 1.471 -2.07 0 N-CA-C 107.968 -1.123 . . . . 31.77 107.968 174.772 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 3' ' ' ILE . . . . . . . . . . . . . 96.8 mt -127.68 125.39 65.19 Favored 'Isoleucine or valine' 0 N--CA 1.429 -1.495 0 O-C-N 124.848 1.343 . . . . 26.21 108.646 -175.805 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 4' ' ' TYR . . . . . . . . . . . . . 28.0 m-85 -121.3 115.79 23.63 Favored 'General case' 0 CA--C 1.464 -2.343 0 O-C-N 124.936 1.397 . . . . 23.42 108.52 179.796 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 5' ' ' GLN . . . . . . . . . . . . . 25.2 mt-30 -124.48 115.93 21.69 Favored 'General case' 0 C--O 1.195 -1.814 0 O-C-N 124.781 1.301 . . . . 36.27 113.096 -179.115 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 6' ' ' TYR . . . . . . . . . . . . . 75.5 m-85 . . . . . 0 N--CA 1.417 -2.117 0 N-CA-C 108.238 -1.023 . . . . 43.13 108.238 -179.278 . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 101' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 1' ' ' LEU . . . . . . . . . . . . . 15.0 tp . . . . . 0 N--CA 1.506 2.338 0 CA-C-O 121.237 0.542 . . . . 34.689999999999998 111.831 . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 2' ' ' ASN . . . . . . . . . . . . . 36.5 m120 -118.67 127.81 53.92 Favored 'General case' 0 CA--C 1.471 -2.07 0 N-CA-C 107.968 -1.123 . . . . 31.77 107.968 174.772 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 3' ' ' ILE . . . . . . . . . . . . . 96.8 mt -127.68 125.39 65.19 Favored 'Isoleucine or valine' 0 N--CA 1.429 -1.495 0 O-C-N 124.848 1.343 . . . . 26.210000000000001 108.646 -175.805 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 4' ' ' TYR . . . . . . . . . . . . . 28.0 m-85 -121.3 115.79 23.63 Favored 'General case' 0 CA--C 1.464 -2.343 0 O-C-N 124.936 1.397 . . . . 23.420000000000002 108.52 179.796 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 5' ' ' GLN . . . . . . . . . . . . . 25.2 mt-30 -124.48 115.93 21.69 Favored 'General case' 0 C--O 1.195 -1.814 0 O-C-N 124.781 1.301 . . . . 36.270000000000003 113.096 -179.115 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 6' ' ' TYR . . . . . . . . . . . . . 75.5 m-85 . . . . . 0 N--CA 1.417 -2.117 0 N-CA-C 108.238 -1.023 . . . . 43.130000000000003 108.238 -179.278 . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 101' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 stop_ save_