data_1dn6_residue save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 1dn6 _Structure_validation_residue.Date_analyzed 2016-10-12 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 ecloud orig full ' A' A ' 1' ' ' ' DG' . . . . . 0.451 ' C6 ' ' C6 ' ' A' ' 2' ' ' ' DG' . . . . . . . . 0 O4'--C4' 1.486 3.658 3 O4'-C1'-N19 116.265 10.581 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud orig full ' A' A ' 2' ' ' ' DG' . . . . . 0.451 ' C6 ' ' C6 ' ' A' ' 1' ' ' ' DG' . . . . . . . . 0 O3'--C3' 1.388 -3.284 4 OP1-P-OP2 109.879 -6.481 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud orig full ' A' A ' 3' ' ' ' DA' . . . . . 0.441 ' C8 ' ' C4 ' ' A' ' 2' ' ' ' DG' . . . . . . . . 1 C2'--C1' 1.589 4.89 10 P-O3'-C3' 139.434 16.445 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud orig full ' A' A ' 4' ' ' ' DT' . . . . . 0.46 ' C2 ' ' C8 ' ' A' ' 5' ' ' ' DG' . . . . . . . . 0 C3'--C2' 1.49 -2.841 4 P-O3'-C3' 145.726 21.689 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud orig full ' A' A ' 5' ' ' ' DG' . . . . . 0.497 ' N1 ' ' C6 ' ' A' ' 6' ' ' ' DG' . . . . . . . . 3 C5'--C4' 1.464 -5.924 8 C4'-C3'-C2' 88.329 -14.871 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud orig full ' A' A ' 6' ' ' ' DG' . . . . . 0.497 ' C6 ' ' N1 ' ' A' ' 5' ' ' ' DG' . . . . . . . . 1 O3'--C3' 1.492 4.684 5 P-O3'-C3' 136.292 13.827 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud orig full ' A' A ' 7' ' ' ' DG' . . . . . 0.593 ' C4 ' ' C8 ' ' A' ' 8' ' ' ' DA' . . . . . . . . 1 P--O5' 1.651 5.794 6 O4'-C1'-N19 117.52 12.15 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud orig full ' A' A ' 8' ' ' ' DA' . . . . . 0.593 ' C8 ' ' C4 ' ' A' ' 7' ' ' ' DG' . . . . . . . . 1 O4'--C4' 1.508 5.595 8 O4'-C1'-N19 139.79 39.987 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud orig full ' A' A ' 9' ' ' ' DG' . . . . . 0.637 ' N1 ' ' N4 ' ' B' ' 10' ' ' ' DC' . . . . . . . . 0 O5'--C5' 1.4 -2.502 6 O5'-C5'-C4' 119.91 6.936 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud orig full ' B' B ' 10' ' ' ' DC' . . . . . 0.637 ' N4 ' ' N1 ' ' A' ' 9' ' ' ' DG' . . . . . . . . 2 C2'--C1' 1.65 9.242 10 O4'-C1'-N19 136.372 35.714 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud orig full ' B' B ' 11' ' ' ' DT' . . . . . 0.512 ' N3 ' ' N2 ' ' A' ' 9' ' ' ' DG' . . . . . . . . 0 O4'--C4' 1.485 3.559 3 P-O5'-C5' 135.591 9.182 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud orig full ' B' B ' 12' ' ' ' DC' . . . . . 0.562 ' N4 ' ' N6 ' ' A' ' 8' ' ' ' DA' . . . . . . . . 0 O5'--C5' 1.386 -3.373 6 P-O5'-C5' 135.026 8.829 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud orig full ' B' B ' 13' ' ' ' DC' . . . . . 0.469 ' O2 ' ' C6 ' ' B' ' 14' ' ' ' DC' . . . . . . . . 0 O4'--C4' 1.467 1.89 6 O4'-C1'-N19 121.808 17.51 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud orig full ' B' B ' 14' ' ' ' DC' . . . . . 0.469 ' C6 ' ' O2 ' ' B' ' 13' ' ' ' DC' . . . . . . . . 1 C5'--C4' 1.462 -6.106 8 O4'-C1'-N19 118.649 13.562 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud orig full ' B' B ' 15' ' ' ' DA' . . . . . 0.465 ' C6 ' ' C6 ' ' A' ' 5' ' ' ' DG' . . . . . . . . 0 C5'--C4' 1.488 -2.841 6 C4'-C3'-C2' 96.499 -6.701 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud orig full ' B' B ' 16' ' ' ' DT' . . . . . . . . . . . . . . . . . . . . 1 O5'--C5' 1.506 4.156 12 O4'-C1'-N19 121.906 17.633 . . . . 46.0 . . . . . . . . . . 2 1 . 1 . 001 ecloud orig full ' B' B ' 17' ' ' ' DC' . . . . . 0.553 ' C2 ' ' C4 ' ' B' ' 18' ' ' ' DC' . . . . . . . . 0 C4'--C3' 1.491 -3.743 3 C5'-C4'-O4' 102.247 -4.471 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud orig full ' B' B ' 18' ' ' ' DC' . . . . . 0.553 ' C4 ' ' C2 ' ' B' ' 17' ' ' ' DC' . . . . . . . . 0 C2'--C1' 1.574 3.818 6 O4'-C1'-N19 128.918 26.397 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud build full ' A' A ' 1' ' ' ' DG' . . . . . 0.493 ' H1 ' ' H42' ' B' ' 18' ' ' ' DC' . . . . . . . . 0 O4'--C4' 1.486 3.658 3 O4'-C1'-N19 116.265 10.581 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud build full ' A' A ' 2' ' ' ' DG' . . . . . 0.607 " H3'" ' H8 ' ' A' ' 3' ' ' ' DA' . . . . . . . . 0 O3'--C3' 1.388 -3.284 4 OP1-P-OP2 109.879 -6.481 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud build full ' A' A ' 3' ' ' ' DA' . . . . . 0.683 " H2'" ' C6 ' ' A' ' 4' ' ' ' DT' . . . . . . . . 1 C2'--C1' 1.589 4.89 10 P-O3'-C3' 139.434 16.445 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud build full ' A' A ' 4' ' ' ' DT' . . . . . 0.683 ' C6 ' " H2'" ' A' ' 3' ' ' ' DA' . . . . . . . . 0 C3'--C2' 1.49 -2.841 4 P-O3'-C3' 145.726 21.689 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud build full ' A' A ' 5' ' ' ' DG' . . . . . 0.703 ' N3 ' " H2'" ' A' ' 5' ' ' ' DG' . . . . . . . . 3 C5'--C4' 1.464 -5.924 8 C4'-C3'-C2' 88.329 -14.871 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud build full ' A' A ' 6' ' ' ' DG' . . . . . 0.515 " C2'" " H5'" ' A' ' 7' ' ' ' DG' . . . . . . . . 1 O3'--C3' 1.492 4.684 5 P-O3'-C3' 136.292 13.827 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud build full ' A' A ' 7' ' ' ' DG' . . . . . 0.593 ' C4 ' ' C8 ' ' A' ' 8' ' ' ' DA' . . . . . . . . 1 P--O5' 1.651 5.794 6 O4'-C1'-N19 117.52 12.15 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud build full ' A' A ' 8' ' ' ' DA' . . . . . 0.815 ' H61' ' H3 ' ' B' ' 11' ' ' ' DT' . . . . . . . . 1 O4'--C4' 1.508 5.595 8 O4'-C1'-N19 139.79 39.987 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud build full ' A' A ' 9' ' ' ' DG' . . . . . 0.637 ' N1 ' ' N4 ' ' B' ' 10' ' ' ' DC' . . . . . . . . 0 O5'--C5' 1.4 -2.502 6 O5'-C5'-C4' 119.91 6.936 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud build full ' B' B ' 10' ' ' ' DC' . . . . . 0.829 H2'' ' H71' ' B' ' 11' ' ' ' DT' . . . . . . . . 2 C2'--C1' 1.65 9.242 10 O4'-C1'-N19 136.372 35.714 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud build full ' B' B ' 11' ' ' ' DT' . . . . . 0.829 ' H71' H2'' ' B' ' 10' ' ' ' DC' . . . . . . . . 0 O4'--C4' 1.485 3.559 3 P-O5'-C5' 135.591 9.182 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud build full ' B' B ' 12' ' ' ' DC' . . . . . 0.571 ' C6 ' " H2'" ' B' ' 11' ' ' ' DT' . . . . . . . . 0 O5'--C5' 1.386 -3.373 6 P-O5'-C5' 135.026 8.829 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud build full ' B' B ' 13' ' ' ' DC' . . . . . 0.639 H2'' ' OP2' ' B' ' 14' ' ' ' DC' . . . . . . . . 0 O4'--C4' 1.467 1.89 6 O4'-C1'-N19 121.808 17.51 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud build full ' B' B ' 14' ' ' ' DC' . . . . . 0.639 ' OP2' H2'' ' B' ' 13' ' ' ' DC' . . . . . . . . 1 C5'--C4' 1.462 -6.106 8 O4'-C1'-N19 118.649 13.562 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud build full ' B' B ' 15' ' ' ' DA' . . . . . 0.653 " H2'" ' C6 ' ' B' ' 16' ' ' ' DT' . . . . . . . . 0 C5'--C4' 1.488 -2.841 6 C4'-C3'-C2' 96.499 -6.701 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud build full ' B' B ' 16' ' ' ' DT' . . . . . 0.653 ' C6 ' " H2'" ' B' ' 15' ' ' ' DA' . . . . . . . . 1 O5'--C5' 1.506 4.156 12 O4'-C1'-N19 121.906 17.633 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud build full ' B' B ' 17' ' ' ' DC' . . . . . 0.632 H2'' ' C6 ' ' B' ' 18' ' ' ' DC' . . . . . . . . 0 C4'--C3' 1.491 -3.743 3 C5'-C4'-O4' 102.247 -4.471 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud build full ' B' B ' 18' ' ' ' DC' . . . . . 0.632 ' C6 ' H2'' ' B' ' 17' ' ' ' DC' . . . . . . . . 0 C2'--C1' 1.574 3.818 6 O4'-C1'-N19 128.918 26.397 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud nobuild full ' A' A ' 1' ' ' ' DG' . . . . . 0.493 ' H1 ' ' H42' ' B' ' 18' ' ' ' DC' . . . . . . . . 0 O4'--C4' 1.486 3.658 3 O4'-C1'-N19 116.265 10.581 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud nobuild full ' A' A ' 2' ' ' ' DG' . . . . . 0.607 " H3'" ' H8 ' ' A' ' 3' ' ' ' DA' . . . . . . . . 0 O3'--C3' 1.388 -3.284 4 OP1-P-OP2 109.879 -6.481 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud nobuild full ' A' A ' 3' ' ' ' DA' . . . . . 0.683 " H2'" ' C6 ' ' A' ' 4' ' ' ' DT' . . . . . . . . 1 C2'--C1' 1.589 4.89 10 P-O3'-C3' 139.434 16.445 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud nobuild full ' A' A ' 4' ' ' ' DT' . . . . . 0.683 ' C6 ' " H2'" ' A' ' 3' ' ' ' DA' . . . . . . . . 0 C3'--C2' 1.49 -2.841 4 P-O3'-C3' 145.726 21.689 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud nobuild full ' A' A ' 5' ' ' ' DG' . . . . . 0.703 ' N3 ' " H2'" ' A' ' 5' ' ' ' DG' . . . . . . . . 3 C5'--C4' 1.464 -5.924 8 C4'-C3'-C2' 88.329 -14.871 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud nobuild full ' A' A ' 6' ' ' ' DG' . . . . . 0.515 " C2'" " H5'" ' A' ' 7' ' ' ' DG' . . . . . . . . 1 O3'--C3' 1.492 4.684 5 P-O3'-C3' 136.292 13.827 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud nobuild full ' A' A ' 7' ' ' ' DG' . . . . . 0.593 ' C4 ' ' C8 ' ' A' ' 8' ' ' ' DA' . . . . . . . . 1 P--O5' 1.651 5.794 6 O4'-C1'-N19 117.52 12.15 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud nobuild full ' A' A ' 8' ' ' ' DA' . . . . . 0.815 ' H61' ' H3 ' ' B' ' 11' ' ' ' DT' . . . . . . . . 1 O4'--C4' 1.508 5.595 8 O4'-C1'-N19 139.79 39.987 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud nobuild full ' A' A ' 9' ' ' ' DG' . . . . . 0.637 ' N1 ' ' N4 ' ' B' ' 10' ' ' ' DC' . . . . . . . . 0 O5'--C5' 1.4 -2.502 6 O5'-C5'-C4' 119.91 6.936 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud nobuild full ' B' B ' 10' ' ' ' DC' . . . . . 0.829 H2'' ' H71' ' B' ' 11' ' ' ' DT' . . . . . . . . 2 C2'--C1' 1.65 9.242 10 O4'-C1'-N19 136.372 35.714 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud nobuild full ' B' B ' 11' ' ' ' DT' . . . . . 0.829 ' H71' H2'' ' B' ' 10' ' ' ' DC' . . . . . . . . 0 O4'--C4' 1.485 3.559 3 P-O5'-C5' 135.591 9.182 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud nobuild full ' B' B ' 12' ' ' ' DC' . . . . . 0.571 ' C6 ' " H2'" ' B' ' 11' ' ' ' DT' . . . . . . . . 0 O5'--C5' 1.386 -3.373 6 P-O5'-C5' 135.026 8.829 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud nobuild full ' B' B ' 13' ' ' ' DC' . . . . . 0.639 H2'' ' OP2' ' B' ' 14' ' ' ' DC' . . . . . . . . 0 O4'--C4' 1.467 1.89 6 O4'-C1'-N19 121.808 17.51 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud nobuild full ' B' B ' 14' ' ' ' DC' . . . . . 0.639 ' OP2' H2'' ' B' ' 13' ' ' ' DC' . . . . . . . . 1 C5'--C4' 1.462 -6.106 8 O4'-C1'-N19 118.649 13.562 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud nobuild full ' B' B ' 15' ' ' ' DA' . . . . . 0.653 " H2'" ' C6 ' ' B' ' 16' ' ' ' DT' . . . . . . . . 0 C5'--C4' 1.488 -2.841 6 C4'-C3'-C2' 96.499 -6.701 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud nobuild full ' B' B ' 16' ' ' ' DT' . . . . . 0.653 ' C6 ' " H2'" ' B' ' 15' ' ' ' DA' . . . . . . . . 1 O5'--C5' 1.506 4.156 12 O4'-C1'-N19 121.906 17.633 . . . . 46.0 . . . . . . . . . . 3 2 . 1 . 001 ecloud nobuild full ' B' B ' 17' ' ' ' DC' . . . . . 0.632 H2'' ' C6 ' ' B' ' 18' ' ' ' DC' . . . . . . . . 0 C4'--C3' 1.491 -3.743 3 C5'-C4'-O4' 102.247 -4.471 . . . . 46.0 . . . . . . . . . . 2 2 . 1 . 001 ecloud nobuild full ' B' B ' 18' ' ' ' DC' . . . . . 0.632 ' C6 ' H2'' ' B' ' 17' ' ' ' DC' . . . . . . . . 0 C2'--C1' 1.574 3.818 6 O4'-C1'-N19 128.918 26.397 . . . . 46.0 . . . . . . . . . . 2 2 . 1 stop_ save_