data_1pfd_oneline save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_oneline _Structure_validation_oneline.Sf_category structure_validation _Structure_validation_oneline.Sf_framecode Structure_validation_oneline _Structure_validation_oneline.Entry_ID ? _Structure_validation_oneline.List_ID 1 _Structure_validation_oneline.PDB_accession_code 1pfd _Structure_validation_oneline.Date_analyzed 2016-10-07 loop_ _Oneline_analysis_software.Software_ID _Oneline_analysis_software.Software_label _Oneline_analysis_software.Method_ID _Oneline_analysis_software.Method_label _Oneline_analysis_software.Entry_ID _Oneline_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Oneline_analysis.ID _Oneline_analysis.PDB_model_num _Oneline_analysis.Hydrogen_positions _Oneline_analysis.MolProbity_flips _Oneline_analysis.Cyrange_core_flag _Oneline_analysis.Assembly_ID _Oneline_analysis.Macromolecule_types _Oneline_analysis.Clashscore _Oneline_analysis.Clashscore_B_under_40 _Oneline_analysis.Cbeta_outlier_count _Oneline_analysis.Cbeta_count _Oneline_analysis.Rotamer_outlier_count _Oneline_analysis.Rotamer_count _Oneline_analysis.Ramachandran_outlier_count _Oneline_analysis.Ramachandran_allowed_count _Oneline_analysis.Ramachandran_favored_count _Oneline_analysis.Ramachandran_count _Oneline_analysis.Bond_outlier_count _Oneline_analysis.Bond_count _Oneline_analysis.Percent_bond_outlier _Oneline_analysis.Percent_residues_with_bond_outlier _Oneline_analysis.Angle_outlier_count _Oneline_analysis.Angle_count _Oneline_analysis.Percent_angle_outlier _Oneline_analysis.Percent_residues_with_angle_outlier _Oneline_analysis.MolProbity_score _Oneline_analysis.RNA_phosphate_perpendicular_outlier_count _Oneline_analysis.RNA_phosphate_perpendicular_count _Oneline_analysis.RNA_suite_outlier_count _Oneline_analysis.RNA_suite_count _Oneline_analysis.Entry_ID _Oneline_analysis.Structure_validation_oneline_list_ID . 001 nuclear orig core . protein 0.00 0.00 0 70 7 66 2 10 55 67 0 296 0.00 0.00 0 363 0.00 0.00 1.99 0 0 0 0 . 1 . 002 nuclear orig core . protein 0.89 0.89 0 70 6 66 2 9 56 67 0 296 0.00 0.00 0 363 0.00 0.00 2.18 0 0 0 0 . 1 . 003 nuclear orig core . protein 1.79 1.79 0 70 5 66 2 10 55 67 0 296 0.00 0.00 0 363 0.00 0.00 2.31 0 0 0 0 . 1 . 004 nuclear orig core . protein 1.79 1.79 0 70 6 66 2 10 55 67 0 296 0.00 0.00 0 363 0.00 0.00 2.37 0 0 0 0 . 1 . 005 nuclear orig core . protein 0.00 0.00 0 70 4 66 1 12 54 67 0 296 0.00 0.00 0 363 0.00 0.00 1.82 0 0 0 0 . 1 . 006 nuclear orig core . protein 0.00 0.00 1 70 7 66 1 12 54 67 0 296 0.00 0.00 0 363 0.00 0.00 2.01 0 0 0 0 . 1 . 007 nuclear orig core . protein 1.79 1.79 0 70 6 66 3 9 55 67 0 296 0.00 0.00 0 363 0.00 0.00 2.37 0 0 0 0 . 1 . 008 nuclear orig core . protein 0.89 0.89 0 70 6 66 1 13 53 67 0 296 0.00 0.00 0 363 0.00 0.00 2.25 0 0 0 0 . 1 . 009 nuclear orig core . protein 0.89 0.89 0 70 6 66 2 12 53 67 0 296 0.00 0.00 0 363 0.00 0.00 2.25 0 0 0 0 . 1 . 010 nuclear orig core . protein 2.68 2.68 0 70 7 66 1 13 53 67 0 296 0.00 0.00 0 363 0.00 0.00 2.58 0 0 0 0 . 1 . 011 nuclear orig core . protein 0.00 0.00 0 70 7 66 1 11 55 67 0 296 0.00 0.00 0 363 0.00 0.00 1.99 0 0 0 0 . 1 . 012 nuclear orig core . protein 0.89 0.89 0 70 6 66 0 10 57 67 0 296 0.00 0.00 1 363 0.28 1.33 2.16 0 0 0 0 . 1 . 013 nuclear orig core . protein 0.00 0.00 0 70 2 66 0 11 56 67 0 296 0.00 0.00 0 363 0.00 0.00 1.55 0 0 0 0 . 1 . 014 nuclear orig core . protein 0.89 0.89 1 70 6 66 1 12 54 67 0 296 0.00 0.00 0 363 0.00 0.00 2.23 0 0 0 0 . 1 . 015 nuclear orig core . protein 2.68 2.68 1 70 5 66 2 9 56 67 0 296 0.00 0.00 0 363 0.00 0.00 2.41 0 0 0 0 . 1 . 016 nuclear orig core . protein 0.00 0.00 0 70 5 66 4 11 52 67 0 296 0.00 0.00 0 363 0.00 0.00 1.93 0 0 0 0 . 1 . 017 nuclear orig core . protein 1.79 1.79 0 70 4 66 0 11 56 67 0 296 0.00 0.00 0 363 0.00 0.00 2.21 0 0 0 0 . 1 . 018 nuclear orig core . protein 1.79 1.79 0 70 5 66 3 12 52 67 0 296 0.00 0.00 0 363 0.00 0.00 2.37 0 0 0 0 . 1 . 001 nuclear orig full . protein 0.00 0.00 0 90 11 84 2 21 71 94 0 383 0.00 0.00 0 477 0.00 0.00 2.14 0 0 0 0 . 1 . 002 nuclear orig full . protein 1.42 1.42 1 90 12 84 7 19 68 94 0 383 0.00 0.00 0 477 0.00 0.00 2.57 0 0 0 0 . 1 . 003 nuclear orig full . protein 2.14 2.14 1 90 6 84 7 21 66 94 0 383 0.00 0.00 0 477 0.00 0.00 2.48 0 0 0 0 . 1 . 004 nuclear orig full . protein 2.85 2.85 0 90 10 84 5 23 66 94 0 383 0.00 0.00 0 477 0.00 0.00 2.73 0 0 0 0 . 1 . 005 nuclear orig full . protein 0.00 0.00 1 90 7 84 5 23 66 94 0 383 0.00 0.00 0 477 0.00 0.00 2.04 0 0 0 0 . 1 . 006 nuclear orig full . protein 0.71 0.71 2 90 10 84 7 24 63 94 0 383 0.00 0.00 0 477 0.00 0.00 2.41 0 0 0 0 . 1 . 007 nuclear orig full . protein 2.85 2.85 0 90 9 84 6 18 70 94 0 383 0.00 0.00 0 477 0.00 0.00 2.66 0 0 0 0 . 1 . 008 nuclear orig full . protein 2.85 2.85 1 90 9 84 8 18 68 94 0 383 0.00 0.00 0 477 0.00 0.00 2.68 0 0 0 0 . 1 . 009 nuclear orig full . protein 0.71 0.71 0 90 9 84 3 23 68 94 0 383 0.00 0.00 0 477 0.00 0.00 2.33 0 0 0 0 . 1 . 010 nuclear orig full . protein 2.14 2.14 1 90 9 84 1 28 65 94 0 383 0.00 0.00 0 477 0.00 0.00 2.62 0 0 0 0 . 1 . 011 nuclear orig full . protein 0.00 0.00 0 90 14 84 4 25 65 94 0 383 0.00 0.00 0 477 0.00 0.00 2.28 0 0 0 0 . 1 . 012 nuclear orig full . protein 1.42 1.42 0 90 8 84 5 24 65 94 0 383 0.00 0.00 1 477 0.21 1.04 2.47 0 0 0 0 . 1 . 013 nuclear orig full . protein 0.71 0.71 0 90 4 84 2 19 73 94 0 383 0.00 0.00 0 477 0.00 0.00 2.01 0 0 0 0 . 1 . 014 nuclear orig full . protein 0.71 0.71 2 90 12 84 5 22 67 94 0 383 0.00 0.00 0 477 0.00 0.00 2.44 0 0 0 0 . 1 . 015 nuclear orig full . protein 4.99 4.99 1 90 8 84 7 18 69 94 0 383 0.00 0.00 0 477 0.00 0.00 2.82 0 0 0 0 . 1 . 016 nuclear orig full . protein 0.71 0.71 0 90 9 84 7 25 62 94 0 383 0.00 0.00 0 477 0.00 0.00 2.38 0 0 0 0 . 1 . 017 nuclear orig full . protein 2.85 2.85 0 90 11 84 3 25 66 94 0 383 0.00 0.00 0 477 0.00 0.00 2.76 0 0 0 0 . 1 . 018 nuclear orig full . protein 3.56 3.56 0 90 7 84 6 22 66 94 0 383 0.00 0.00 0 477 0.00 0.00 2.68 0 0 0 0 . 1 . 001 nuclear build core . protein 7.17 7.17 0 70 7 66 2 10 55 67 0 296 0.00 0.00 0 363 0.00 0.00 2.88 0 0 0 0 . 1 . 002 nuclear build core . protein 14.35 14.35 0 70 6 66 2 9 56 67 0 296 0.00 0.00 0 363 0.00 0.00 3.07 0 0 0 0 . 1 . 003 nuclear build core . protein 9.87 9.87 0 70 5 66 2 10 55 67 0 296 0.00 0.00 0 363 0.00 0.00 2.89 0 0 0 0 . 1 . 004 nuclear build core . protein 14.35 14.35 0 70 6 66 2 10 55 67 0 296 0.00 0.00 0 363 0.00 0.00 3.10 0 0 0 0 . 1 . 005 nuclear build core . protein 11.66 11.66 0 70 4 66 1 12 54 67 0 296 0.00 0.00 0 363 0.00 0.00 2.90 0 0 0 0 . 1 . 006 nuclear build core . protein 16.14 16.14 1 70 7 66 1 12 54 67 0 296 0.00 0.00 0 363 0.00 0.00 3.22 0 0 0 0 . 1 . 007 nuclear build core . protein 17.94 17.94 0 70 6 66 3 9 55 67 0 296 0.00 0.00 0 363 0.00 0.00 3.19 0 0 0 0 . 1 . 008 nuclear build core . protein 11.66 11.66 0 70 6 66 1 13 53 67 0 296 0.00 0.00 0 363 0.00 0.00 3.06 0 0 0 0 . 1 . 009 nuclear build core . protein 8.97 8.97 0 70 6 66 2 12 53 67 0 296 0.00 0.00 0 363 0.00 0.00 2.95 0 0 0 0 . 1 . 010 nuclear build core . protein 11.66 11.66 0 70 7 66 1 13 53 67 0 296 0.00 0.00 0 363 0.00 0.00 3.11 0 0 0 0 . 1 . 011 nuclear build core . protein 8.97 8.97 0 70 7 66 1 11 55 67 0 296 0.00 0.00 0 363 0.00 0.00 2.96 0 0 0 0 . 1 . 012 nuclear build core . protein 14.35 14.35 0 70 6 66 0 10 57 67 0 296 0.00 0.00 1 363 0.28 1.33 3.05 0 0 0 0 . 1 . 013 nuclear build core . protein 11.66 11.66 0 70 2 66 0 11 56 67 0 296 0.00 0.00 0 363 0.00 0.00 2.63 0 0 0 0 . 1 . 014 nuclear build core . protein 11.66 11.66 1 70 6 66 1 12 54 67 0 296 0.00 0.00 0 363 0.00 0.00 3.04 0 0 0 0 . 1 . 015 nuclear build core . protein 12.56 12.56 1 70 5 66 2 9 56 67 0 296 0.00 0.00 0 363 0.00 0.00 2.96 0 0 0 0 . 1 . 016 nuclear build core . protein 11.66 11.66 0 70 5 66 4 11 52 67 0 296 0.00 0.00 0 363 0.00 0.00 3.01 0 0 0 0 . 1 . 017 nuclear build core . protein 19.73 19.73 0 70 4 66 0 11 56 67 0 296 0.00 0.00 0 363 0.00 0.00 3.07 0 0 0 0 . 1 . 018 nuclear build core . protein 9.87 9.87 0 70 5 66 3 12 52 67 0 296 0.00 0.00 0 363 0.00 0.00 2.95 0 0 0 0 . 1 . 001 nuclear build full . protein 7.12 7.12 0 90 11 84 2 21 71 94 0 383 0.00 0.00 0 477 0.00 0.00 3.03 0 0 0 0 . 1 . 002 nuclear build full . protein 12.10 12.10 1 90 12 84 7 19 68 94 0 383 0.00 0.00 0 477 0.00 0.00 3.29 0 0 0 0 . 1 . 003 nuclear build full . protein 9.25 9.25 1 90 6 84 7 21 66 94 0 383 0.00 0.00 0 477 0.00 0.00 2.98 0 0 0 0 . 1 . 004 nuclear build full . protein 14.95 14.95 0 90 10 84 5 23 66 94 0 383 0.00 0.00 0 477 0.00 0.00 3.34 0 0 0 0 . 1 . 005 nuclear build full . protein 10.68 10.68 1 90 7 84 5 23 66 94 0 383 0.00 0.00 0 477 0.00 0.00 3.09 0 0 0 0 . 1 . 006 nuclear build full . protein 15.66 15.66 2 90 10 84 7 24 63 94 0 383 0.00 0.00 0 477 0.00 0.00 3.38 0 0 0 0 . 1 . 007 nuclear build full . protein 16.37 16.37 0 90 9 84 6 18 70 94 0 383 0.00 0.00 0 477 0.00 0.00 3.30 0 0 0 0 . 1 . 008 nuclear build full . protein 12.81 12.81 1 90 9 84 8 18 68 94 0 383 0.00 0.00 0 477 0.00 0.00 3.22 0 0 0 0 . 1 . 009 nuclear build full . protein 8.54 8.54 0 90 9 84 3 23 68 94 0 383 0.00 0.00 0 477 0.00 0.00 3.06 0 0 0 0 . 1 . 010 nuclear build full . protein 11.39 11.39 1 90 9 84 1 28 65 94 0 383 0.00 0.00 0 477 0.00 0.00 3.20 0 0 0 0 . 1 . 011 nuclear build full . protein 7.83 7.83 0 90 14 84 4 25 65 94 0 383 0.00 0.00 0 477 0.00 0.00 3.20 0 0 0 0 . 1 . 012 nuclear build full . protein 14.23 14.23 0 90 8 84 5 24 65 94 0 383 0.00 0.00 1 477 0.21 1.04 3.25 0 0 0 0 . 1 . 013 nuclear build full . protein 12.10 12.10 0 90 4 84 2 19 73 94 0 383 0.00 0.00 0 477 0.00 0.00 2.87 0 0 0 0 . 1 . 014 nuclear build full . protein 12.81 12.81 2 90 12 84 5 22 67 94 0 383 0.00 0.00 0 477 0.00 0.00 3.33 0 0 0 0 . 1 . 015 nuclear build full . protein 15.66 15.66 1 90 8 84 7 18 69 94 0 383 0.00 0.00 0 477 0.00 0.00 3.25 0 0 0 0 . 1 . 016 nuclear build full . protein 12.81 12.81 0 90 9 84 7 25 62 94 0 383 0.00 0.00 0 477 0.00 0.00 3.27 0 0 0 0 . 1 . 017 nuclear build full . protein 20.64 20.64 0 90 11 84 3 25 66 94 0 383 0.00 0.00 0 477 0.00 0.00 3.50 0 0 0 0 . 1 . 018 nuclear build full . protein 12.81 12.81 0 90 7 84 6 22 66 94 0 383 0.00 0.00 0 477 0.00 0.00 3.16 0 0 0 0 . 1 . 001 nuclear nobuild core . protein 7.17 7.17 0 70 7 66 2 10 55 67 0 296 0.00 0.00 0 363 0.00 0.00 2.88 0 0 0 0 . 1 . 002 nuclear nobuild core . protein 14.35 14.35 0 70 6 66 2 9 56 67 0 296 0.00 0.00 0 363 0.00 0.00 3.07 0 0 0 0 . 1 . 003 nuclear nobuild core . protein 9.87 9.87 0 70 5 66 2 10 55 67 0 296 0.00 0.00 0 363 0.00 0.00 2.89 0 0 0 0 . 1 . 004 nuclear nobuild core . protein 14.35 14.35 0 70 6 66 2 10 55 67 0 296 0.00 0.00 0 363 0.00 0.00 3.10 0 0 0 0 . 1 . 005 nuclear nobuild core . protein 11.66 11.66 0 70 4 66 1 12 54 67 0 296 0.00 0.00 0 363 0.00 0.00 2.90 0 0 0 0 . 1 . 006 nuclear nobuild core . protein 16.14 16.14 1 70 7 66 1 12 54 67 0 296 0.00 0.00 0 363 0.00 0.00 3.22 0 0 0 0 . 1 . 007 nuclear nobuild core . protein 17.94 17.94 0 70 6 66 3 9 55 67 0 296 0.00 0.00 0 363 0.00 0.00 3.19 0 0 0 0 . 1 . 008 nuclear nobuild core . protein 11.66 11.66 0 70 6 66 1 13 53 67 0 296 0.00 0.00 0 363 0.00 0.00 3.06 0 0 0 0 . 1 . 009 nuclear nobuild core . protein 8.97 8.97 0 70 6 66 2 12 53 67 0 296 0.00 0.00 0 363 0.00 0.00 2.95 0 0 0 0 . 1 . 010 nuclear nobuild core . protein 11.66 11.66 0 70 7 66 1 13 53 67 0 296 0.00 0.00 0 363 0.00 0.00 3.11 0 0 0 0 . 1 . 011 nuclear nobuild core . protein 8.97 8.97 0 70 7 66 1 11 55 67 0 296 0.00 0.00 0 363 0.00 0.00 2.96 0 0 0 0 . 1 . 012 nuclear nobuild core . protein 15.25 15.25 0 70 6 66 0 10 57 67 0 296 0.00 0.00 1 363 0.28 1.33 3.07 0 0 0 0 . 1 . 013 nuclear nobuild core . protein 11.66 11.66 0 70 2 66 0 11 56 67 0 296 0.00 0.00 0 363 0.00 0.00 2.63 0 0 0 0 . 1 . 014 nuclear nobuild core . protein 11.66 11.66 1 70 6 66 1 12 54 67 0 296 0.00 0.00 0 363 0.00 0.00 3.04 0 0 0 0 . 1 . 015 nuclear nobuild core . protein 12.56 12.56 1 70 5 66 2 9 56 67 0 296 0.00 0.00 0 363 0.00 0.00 2.96 0 0 0 0 . 1 . 016 nuclear nobuild core . protein 11.66 11.66 0 70 5 66 4 11 52 67 0 296 0.00 0.00 0 363 0.00 0.00 3.01 0 0 0 0 . 1 . 017 nuclear nobuild core . protein 19.73 19.73 0 70 4 66 0 11 56 67 0 296 0.00 0.00 0 363 0.00 0.00 3.07 0 0 0 0 . 1 . 018 nuclear nobuild core . protein 9.87 9.87 0 70 5 66 3 12 52 67 0 296 0.00 0.00 0 363 0.00 0.00 2.95 0 0 0 0 . 1 . 001 nuclear nobuild full . protein 7.12 7.12 0 90 11 84 2 21 71 94 0 383 0.00 0.00 0 477 0.00 0.00 3.03 0 0 0 0 . 1 . 002 nuclear nobuild full . protein 12.10 12.10 1 90 12 84 7 19 68 94 0 383 0.00 0.00 0 477 0.00 0.00 3.29 0 0 0 0 . 1 . 003 nuclear nobuild full . protein 9.25 9.25 1 90 6 84 7 21 66 94 0 383 0.00 0.00 0 477 0.00 0.00 2.98 0 0 0 0 . 1 . 004 nuclear nobuild full . protein 14.95 14.95 0 90 10 84 5 23 66 94 0 383 0.00 0.00 0 477 0.00 0.00 3.34 0 0 0 0 . 1 . 005 nuclear nobuild full . protein 10.68 10.68 1 90 7 84 5 23 66 94 0 383 0.00 0.00 0 477 0.00 0.00 3.09 0 0 0 0 . 1 . 006 nuclear nobuild full . protein 15.66 15.66 2 90 10 84 7 24 63 94 0 383 0.00 0.00 0 477 0.00 0.00 3.38 0 0 0 0 . 1 . 007 nuclear nobuild full . protein 16.37 16.37 0 90 9 84 6 18 70 94 0 383 0.00 0.00 0 477 0.00 0.00 3.30 0 0 0 0 . 1 . 008 nuclear nobuild full . protein 12.81 12.81 1 90 9 84 8 18 68 94 0 383 0.00 0.00 0 477 0.00 0.00 3.22 0 0 0 0 . 1 . 009 nuclear nobuild full . protein 8.54 8.54 0 90 9 84 3 23 68 94 0 383 0.00 0.00 0 477 0.00 0.00 3.06 0 0 0 0 . 1 . 010 nuclear nobuild full . protein 11.39 11.39 1 90 9 84 1 28 65 94 0 383 0.00 0.00 0 477 0.00 0.00 3.20 0 0 0 0 . 1 . 011 nuclear nobuild full . protein 7.83 7.83 0 90 14 84 4 25 65 94 0 383 0.00 0.00 0 477 0.00 0.00 3.20 0 0 0 0 . 1 . 012 nuclear nobuild full . protein 14.95 14.95 0 90 8 84 5 24 65 94 0 383 0.00 0.00 1 477 0.21 1.04 3.27 0 0 0 0 . 1 . 013 nuclear nobuild full . protein 12.10 12.10 0 90 4 84 2 19 73 94 0 383 0.00 0.00 0 477 0.00 0.00 2.87 0 0 0 0 . 1 . 014 nuclear nobuild full . protein 12.81 12.81 2 90 12 84 5 22 67 94 0 383 0.00 0.00 0 477 0.00 0.00 3.33 0 0 0 0 . 1 . 015 nuclear nobuild full . protein 15.66 15.66 1 90 8 84 7 18 69 94 0 383 0.00 0.00 0 477 0.00 0.00 3.25 0 0 0 0 . 1 . 016 nuclear nobuild full . protein 12.81 12.81 0 90 9 84 7 25 62 94 0 383 0.00 0.00 0 477 0.00 0.00 3.27 0 0 0 0 . 1 . 017 nuclear nobuild full . protein 20.64 20.64 0 90 11 84 3 25 66 94 0 383 0.00 0.00 0 477 0.00 0.00 3.50 0 0 0 0 . 1 . 018 nuclear nobuild full . protein 12.81 12.81 0 90 7 84 6 22 66 94 0 383 0.00 0.00 0 477 0.00 0.00 3.16 0 0 0 0 . 1 stop_ save_