data_1pd7_oneline save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_oneline _Structure_validation_oneline.Sf_category structure_validation _Structure_validation_oneline.Sf_framecode Structure_validation_oneline _Structure_validation_oneline.Entry_ID ? _Structure_validation_oneline.List_ID 1 _Structure_validation_oneline.PDB_accession_code 1pd7 _Structure_validation_oneline.Date_analyzed 2016-10-08 loop_ _Oneline_analysis_software.Software_ID _Oneline_analysis_software.Software_label _Oneline_analysis_software.Method_ID _Oneline_analysis_software.Method_label _Oneline_analysis_software.Entry_ID _Oneline_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Oneline_analysis.ID _Oneline_analysis.PDB_model_num _Oneline_analysis.Hydrogen_positions _Oneline_analysis.MolProbity_flips _Oneline_analysis.Cyrange_core_flag _Oneline_analysis.Assembly_ID _Oneline_analysis.Macromolecule_types _Oneline_analysis.Clashscore _Oneline_analysis.Clashscore_B_under_40 _Oneline_analysis.Cbeta_outlier_count _Oneline_analysis.Cbeta_count _Oneline_analysis.Rotamer_outlier_count _Oneline_analysis.Rotamer_count _Oneline_analysis.Ramachandran_outlier_count _Oneline_analysis.Ramachandran_allowed_count _Oneline_analysis.Ramachandran_favored_count _Oneline_analysis.Ramachandran_count _Oneline_analysis.Bond_outlier_count _Oneline_analysis.Bond_count _Oneline_analysis.Percent_bond_outlier _Oneline_analysis.Percent_residues_with_bond_outlier _Oneline_analysis.Angle_outlier_count _Oneline_analysis.Angle_count _Oneline_analysis.Percent_angle_outlier _Oneline_analysis.Percent_residues_with_angle_outlier _Oneline_analysis.MolProbity_score _Oneline_analysis.RNA_phosphate_perpendicular_outlier_count _Oneline_analysis.RNA_phosphate_perpendicular_count _Oneline_analysis.RNA_suite_outlier_count _Oneline_analysis.RNA_suite_count _Oneline_analysis.Entry_ID _Oneline_analysis.Structure_validation_oneline_list_ID . 001 nuclear build core . protein 4.04 4.04 1 73 8 69 0 3 66 69 0 297 0.00 0.00 0 366 0.00 0.00 2.30 0 0 0 0 . 1 . 002 nuclear build core . protein 5.65 5.65 2 73 8 69 1 1 67 69 0 297 0.00 0.00 0 366 0.00 0.00 2.28 0 0 0 0 . 1 . 003 nuclear build core . protein 7.26 7.26 4 73 10 69 0 3 66 69 0 297 0.00 0.00 0 366 0.00 0.00 2.58 0 0 0 0 . 1 . 004 nuclear build core . protein 6.46 6.46 3 73 8 69 0 2 67 69 0 297 0.00 0.00 0 366 0.00 0.00 2.32 0 0 0 0 . 1 . 005 nuclear build core . protein 8.07 8.07 2 73 11 69 0 1 68 69 0 297 0.00 0.00 0 366 0.00 0.00 2.35 0 0 0 0 . 1 . 006 nuclear build core . protein 6.46 6.46 5 73 11 69 0 3 66 69 0 297 0.00 0.00 0 366 0.00 0.00 2.57 0 0 0 0 . 1 . 007 nuclear build core . protein 4.04 4.04 2 73 8 69 1 2 66 69 0 297 0.00 0.00 1 366 0.27 1.33 2.30 0 0 0 0 . 1 . 008 nuclear build core . protein 8.88 8.88 2 73 7 69 0 3 66 69 0 297 0.00 0.00 0 366 0.00 0.00 2.54 0 0 0 0 . 1 . 009 nuclear build core . protein 7.26 7.26 4 73 9 69 0 1 68 69 0 297 0.00 0.00 0 366 0.00 0.00 2.25 0 0 0 0 . 1 . 010 nuclear build core . protein 6.46 6.46 4 73 12 69 1 2 66 69 0 297 0.00 0.00 0 366 0.00 0.00 2.60 0 0 0 0 . 1 . 011 nuclear build core . protein 4.04 4.04 2 73 10 69 0 2 67 69 0 297 0.00 0.00 0 366 0.00 0.00 2.23 0 0 0 0 . 1 . 012 nuclear build core . protein 4.84 4.84 2 73 7 69 0 4 65 69 0 297 0.00 0.00 0 366 0.00 0.00 2.41 0 0 0 0 . 1 . 013 nuclear build core . protein 5.65 5.65 2 73 9 69 0 2 67 69 0 297 0.00 0.00 1 366 0.27 1.33 2.31 0 0 0 0 . 1 . 014 nuclear build core . protein 8.07 8.07 1 73 11 69 0 2 67 69 0 297 0.00 0.00 0 366 0.00 0.00 2.51 0 0 0 0 . 1 . 015 nuclear build core . protein 6.46 6.46 3 73 7 69 1 2 66 69 0 297 0.00 0.00 0 366 0.00 0.00 2.42 0 0 0 0 . 1 . 016 nuclear build core . protein 6.46 6.46 2 73 7 69 0 1 68 69 0 297 0.00 0.00 0 366 0.00 0.00 2.12 0 0 0 0 . 1 . 017 nuclear build core . protein 3.23 3.23 2 73 9 69 0 2 67 69 0 297 0.00 0.00 0 366 0.00 0.00 2.12 0 0 0 0 . 1 . 018 nuclear build core . protein 6.46 6.46 1 73 8 69 0 2 67 69 0 297 0.00 0.00 0 366 0.00 0.00 2.32 0 0 0 0 . 1 . 019 nuclear build core . protein 5.65 5.65 3 73 8 69 0 3 66 69 0 297 0.00 0.00 0 366 0.00 0.00 2.42 0 0 0 0 . 1 . 020 nuclear build core . protein 2.42 2.42 3 73 7 69 0 3 66 69 0 297 0.00 0.00 0 366 0.00 0.00 2.09 0 0 0 0 . 1 . 021 nuclear build core . protein 6.46 6.46 1 73 9 69 0 2 67 69 0 297 0.00 0.00 0 366 0.00 0.00 2.36 0 0 0 0 . 1 . 022 nuclear build core . protein 4.84 4.84 1 73 8 69 0 2 67 69 0 297 0.00 0.00 0 366 0.00 0.00 2.22 0 0 0 0 . 1 . 023 nuclear build core . protein 4.04 4.04 0 73 10 69 0 3 66 69 0 297 0.00 0.00 0 366 0.00 0.00 2.37 0 0 0 0 . 1 . 024 nuclear build core . protein 6.46 6.46 1 73 10 69 1 3 65 69 0 297 0.00 0.00 1 366 0.27 1.33 2.63 0 0 0 0 . 1 . 025 nuclear build core . protein 5.65 5.65 1 73 7 69 0 2 67 69 0 297 0.00 0.00 0 366 0.00 0.00 2.23 0 0 0 0 . 1 . 026 nuclear build core . protein 8.88 8.88 4 73 12 69 0 2 67 69 0 297 0.00 0.00 0 366 0.00 0.00 2.58 0 0 0 0 . 1 . 027 nuclear build core . protein 8.88 8.88 2 73 7 69 0 3 66 69 0 297 0.00 0.00 0 366 0.00 0.00 2.54 0 0 0 0 . 1 . 028 nuclear build core . protein 8.07 8.07 2 73 10 69 0 3 66 69 0 297 0.00 0.00 0 366 0.00 0.00 2.62 0 0 0 0 . 1 . 029 nuclear build core . protein 4.84 4.84 0 73 7 69 0 2 67 69 0 297 0.00 0.00 0 366 0.00 0.00 2.18 0 0 0 0 . 1 . 030 nuclear build core . protein 5.65 5.65 3 73 7 69 0 4 65 69 0 297 0.00 0.00 0 366 0.00 0.00 2.46 0 0 0 0 . 1 . 001 nuclear build full . protein 2.76 2.76 2 105 11 99 1 12 92 105 0 434 0.00 0.00 0 539 0.00 0.00 2.47 0 0 0 0 . 1 . 002 nuclear build full . protein 4.42 4.42 5 105 11 99 3 11 91 105 0 434 0.00 0.00 1 539 0.19 0.92 2.64 0 0 0 0 . 1 . 003 nuclear build full . protein 5.52 5.52 6 105 11 99 0 9 96 105 0 434 0.00 0.00 0 539 0.00 0.00 2.60 0 0 0 0 . 1 . 004 nuclear build full . protein 5.52 5.52 3 105 10 99 2 13 90 105 0 434 0.00 0.00 0 539 0.00 0.00 2.71 0 0 0 0 . 1 . 005 nuclear build full . protein 6.63 6.63 8 105 16 99 2 11 92 105 0 434 0.00 0.00 0 539 0.00 0.00 2.89 0 0 0 0 . 1 . 006 nuclear build full . protein 5.52 5.52 9 105 15 99 1 13 91 105 0 434 0.00 0.00 0 539 0.00 0.00 2.82 0 0 0 0 . 1 . 007 nuclear build full . protein 3.31 3.31 4 105 10 99 2 10 93 105 0 434 0.00 0.00 2 539 0.37 1.83 2.47 0 0 0 0 . 1 . 008 nuclear build full . protein 6.08 6.08 3 105 10 99 2 13 90 105 0 434 0.00 0.00 1 539 0.19 0.92 2.74 0 0 0 0 . 1 . 009 nuclear build full . protein 4.97 4.97 6 105 11 99 2 6 97 105 0 434 0.00 0.00 1 539 0.19 0.92 2.53 0 0 0 0 . 1 . 010 nuclear build full . protein 4.42 4.42 6 105 14 99 3 12 90 105 0 434 0.00 0.00 1 539 0.19 0.92 2.74 0 0 0 0 . 1 . 011 nuclear build full . protein 2.76 2.76 3 105 12 99 4 8 93 105 0 434 0.00 0.00 0 539 0.00 0.00 2.47 0 0 0 0 . 1 . 012 nuclear build full . protein 4.42 4.42 4 105 9 99 3 9 93 105 0 434 0.00 0.00 1 539 0.19 0.92 2.53 0 0 0 0 . 1 . 013 nuclear build full . protein 4.97 4.97 4 105 11 99 1 12 92 105 0 434 0.00 0.00 1 539 0.19 0.92 2.66 0 0 0 0 . 1 . 014 nuclear build full . protein 5.52 5.52 3 105 13 99 2 12 91 105 0 434 0.00 0.00 0 539 0.00 0.00 2.78 0 0 0 0 . 1 . 015 nuclear build full . protein 4.42 4.42 6 105 10 99 4 7 94 105 0 434 0.00 0.00 0 539 0.00 0.00 2.54 0 0 0 0 . 1 . 016 nuclear build full . protein 4.97 4.97 5 105 10 99 2 11 92 105 0 434 0.00 0.00 0 539 0.00 0.00 2.63 0 0 0 0 . 1 . 017 nuclear build full . protein 2.76 2.76 4 105 10 99 3 9 93 105 0 434 0.00 0.00 0 539 0.00 0.00 2.41 0 0 0 0 . 1 . 018 nuclear build full . protein 4.42 4.42 4 105 9 99 1 16 88 105 0 434 0.00 0.00 0 539 0.00 0.00 2.63 0 0 0 0 . 1 . 019 nuclear build full . protein 3.87 3.87 5 105 11 99 3 9 93 105 0 434 0.00 0.00 0 539 0.00 0.00 2.55 0 0 0 0 . 1 . 020 nuclear build full . protein 1.66 1.66 6 105 10 99 0 12 93 105 0 434 0.00 0.00 0 539 0.00 0.00 2.27 0 0 0 0 . 1 . 021 nuclear build full . protein 4.42 4.42 4 105 10 99 1 10 94 105 0 434 0.00 0.00 0 539 0.00 0.00 2.54 0 0 0 0 . 1 . 022 nuclear build full . protein 4.42 4.42 3 105 10 99 4 10 91 105 0 434 0.00 0.00 0 539 0.00 0.00 2.61 0 0 0 0 . 1 . 023 nuclear build full . protein 2.76 2.76 2 105 12 99 3 14 88 105 0 434 0.00 0.00 0 539 0.00 0.00 2.57 0 0 0 0 . 1 . 024 nuclear build full . protein 4.42 4.42 2 105 14 99 4 15 86 105 0 434 0.00 0.00 1 539 0.19 0.92 2.80 0 0 0 0 . 1 . 025 nuclear build full . protein 4.42 4.42 4 105 8 99 2 8 95 105 0 434 0.00 0.00 0 539 0.00 0.00 2.44 0 0 0 0 . 1 . 026 nuclear build full . protein 6.08 6.08 7 105 13 99 3 10 92 105 0 434 0.00 0.00 0 539 0.00 0.00 2.79 0 0 0 0 . 1 . 027 nuclear build full . protein 7.18 7.18 5 105 8 99 2 11 92 105 0 434 0.00 0.00 0 539 0.00 0.00 2.69 0 0 0 0 . 1 . 028 nuclear build full . protein 6.63 6.63 5 105 13 99 3 9 93 105 0 434 0.00 0.00 0 539 0.00 0.00 2.80 0 0 0 0 . 1 . 029 nuclear build full . protein 4.42 4.42 0 105 10 99 3 8 94 105 0 434 0.00 0.00 0 539 0.00 0.00 2.54 0 0 0 0 . 1 . 030 nuclear build full . protein 3.87 3.87 4 105 10 99 1 11 93 105 0 434 0.00 0.00 0 539 0.00 0.00 2.52 0 0 0 0 . 1 stop_ save_