data_1ykg_oneline save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_oneline _Structure_validation_oneline.Sf_category structure_validation _Structure_validation_oneline.Sf_framecode Structure_validation_oneline _Structure_validation_oneline.Entry_ID ? _Structure_validation_oneline.List_ID 1 _Structure_validation_oneline.PDB_accession_code 1ykg _Structure_validation_oneline.Date_analyzed 2016-10-07 loop_ _Oneline_analysis_software.Software_ID _Oneline_analysis_software.Software_label _Oneline_analysis_software.Method_ID _Oneline_analysis_software.Method_label _Oneline_analysis_software.Entry_ID _Oneline_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Oneline_analysis.ID _Oneline_analysis.PDB_model_num _Oneline_analysis.Hydrogen_positions _Oneline_analysis.MolProbity_flips _Oneline_analysis.Cyrange_core_flag _Oneline_analysis.Assembly_ID _Oneline_analysis.Macromolecule_types _Oneline_analysis.Clashscore _Oneline_analysis.Clashscore_B_under_40 _Oneline_analysis.Cbeta_outlier_count _Oneline_analysis.Cbeta_count _Oneline_analysis.Rotamer_outlier_count _Oneline_analysis.Rotamer_count _Oneline_analysis.Ramachandran_outlier_count _Oneline_analysis.Ramachandran_allowed_count _Oneline_analysis.Ramachandran_favored_count _Oneline_analysis.Ramachandran_count _Oneline_analysis.Bond_outlier_count _Oneline_analysis.Bond_count _Oneline_analysis.Percent_bond_outlier _Oneline_analysis.Percent_residues_with_bond_outlier _Oneline_analysis.Angle_outlier_count _Oneline_analysis.Angle_count _Oneline_analysis.Percent_angle_outlier _Oneline_analysis.Percent_residues_with_angle_outlier _Oneline_analysis.MolProbity_score _Oneline_analysis.RNA_phosphate_perpendicular_outlier_count _Oneline_analysis.RNA_phosphate_perpendicular_count _Oneline_analysis.RNA_suite_outlier_count _Oneline_analysis.RNA_suite_count _Oneline_analysis.Entry_ID _Oneline_analysis.Structure_validation_oneline_list_ID . 001 nuclear orig core . protein 1.99 1.99 5 123 8 104 4 4 119 127 0 522 0.00 0.00 3 649 0.46 1.53 2.06 0 0 0 0 . 1 . 002 nuclear orig core . protein 1.00 1.00 1 123 9 104 1 5 121 127 0 522 0.00 0.00 1 649 0.15 0.76 1.84 0 0 0 0 . 1 . 003 nuclear orig core . protein 1.50 1.50 3 123 11 104 0 5 122 127 0 522 0.00 0.00 1 649 0.15 0.76 1.94 0 0 0 0 . 1 . 004 nuclear orig core . protein 1.50 1.50 5 123 11 104 3 6 118 127 0 522 0.00 0.00 2 649 0.31 1.53 2.12 0 0 0 0 . 1 . 005 nuclear orig core . protein 1.50 1.50 3 123 11 104 1 7 119 127 0 522 0.00 0.00 1 649 0.15 0.76 2.08 0 0 0 0 . 1 . 006 nuclear orig core . protein 1.99 1.99 3 123 11 104 1 3 123 127 0 522 0.00 0.00 1 649 0.15 0.76 1.94 0 0 0 0 . 1 . 007 nuclear orig core . protein 1.00 1.00 4 123 12 104 2 4 121 127 0 522 0.00 0.00 1 649 0.15 0.76 1.93 0 0 0 0 . 1 . 008 nuclear orig core . protein 1.00 1.00 2 123 6 104 1 5 121 127 0 522 0.00 0.00 1 649 0.15 0.76 1.70 0 0 0 0 . 1 . 009 nuclear orig core . protein 1.99 1.99 2 123 9 104 2 4 121 127 0 522 0.00 0.00 1 649 0.15 0.76 2.01 0 0 0 0 . 1 . 010 nuclear orig core . protein 1.50 1.50 4 123 10 104 1 4 122 127 0 522 0.00 0.00 1 649 0.15 0.76 1.91 0 0 0 0 . 1 . 011 nuclear orig core . protein 1.50 1.50 3 123 8 104 3 5 119 127 0 522 0.00 0.00 3 649 0.46 2.29 1.98 0 0 0 0 . 1 . 012 nuclear orig core . protein 3.99 3.99 2 123 8 104 3 5 119 127 0 522 0.00 0.00 2 649 0.31 1.53 2.27 0 0 0 0 . 1 . 013 nuclear orig core . protein 1.50 1.50 3 123 10 104 0 5 122 127 0 522 0.00 0.00 1 649 0.15 0.76 1.91 0 0 0 0 . 1 . 014 nuclear orig core . protein 0.50 0.50 2 123 14 104 2 4 121 127 0 522 0.00 0.00 3 649 0.46 2.29 1.86 0 0 0 0 . 1 . 015 nuclear orig core . protein 2.49 2.49 3 123 11 104 3 5 119 127 0 522 0.00 0.00 1 649 0.15 0.76 2.23 0 0 0 0 . 1 . 001 nuclear orig full . protein 2.16 2.16 5 138 10 117 4 6 134 144 0 583 0.00 0.00 3 727 0.41 1.37 2.14 0 0 0 0 . 1 . 002 nuclear orig full . protein 1.30 1.30 1 138 10 117 1 6 137 144 0 583 0.00 0.00 1 727 0.14 0.68 1.90 0 0 0 0 . 1 . 003 nuclear orig full . protein 1.73 1.73 3 138 12 117 0 8 136 144 0 583 0.00 0.00 1 727 0.14 0.68 2.07 0 0 0 0 . 1 . 004 nuclear orig full . protein 1.30 1.30 5 138 13 117 3 9 132 144 0 583 0.00 0.00 2 727 0.28 1.37 2.15 0 0 0 0 . 1 . 005 nuclear orig full . protein 1.73 1.73 3 138 12 117 2 9 133 144 0 583 0.00 0.00 3 727 0.41 2.05 2.17 0 0 0 0 . 1 . 006 nuclear orig full . protein 1.73 1.73 3 138 11 117 1 5 138 144 0 583 0.00 0.00 1 727 0.14 0.68 1.95 0 0 0 0 . 1 . 007 nuclear orig full . protein 0.87 0.87 4 138 13 117 5 5 134 144 0 583 0.00 0.00 2 727 0.28 1.37 2.01 0 0 0 0 . 1 . 008 nuclear orig full . protein 1.30 1.30 3 138 8 117 3 8 133 144 0 583 0.00 0.00 1 727 0.14 0.68 1.96 0 0 0 0 . 1 . 009 nuclear orig full . protein 1.73 1.73 2 138 11 117 2 7 135 144 0 583 0.00 0.00 1 727 0.14 0.68 2.08 0 0 0 0 . 1 . 010 nuclear orig full . protein 1.30 1.30 4 138 11 117 2 11 131 144 0 583 0.00 0.00 1 727 0.14 0.68 2.11 0 0 0 0 . 1 . 011 nuclear orig full . protein 1.30 1.30 3 138 8 117 3 8 133 144 0 583 0.00 0.00 3 727 0.41 2.05 1.96 0 0 0 0 . 1 . 012 nuclear orig full . protein 3.46 3.46 3 138 11 117 5 7 132 144 0 583 0.00 0.00 5 727 0.69 2.74 2.37 0 0 0 0 . 1 . 013 nuclear orig full . protein 2.16 2.16 3 138 12 117 1 9 134 144 0 583 0.00 0.00 3 727 0.41 2.05 2.20 0 0 0 0 . 1 . 014 nuclear orig full . protein 0.87 0.87 2 138 16 117 2 9 133 144 0 583 0.00 0.00 7 727 0.96 4.79 2.10 0 0 0 0 . 1 . 015 nuclear orig full . protein 4.76 4.76 4 138 15 117 4 10 130 144 0 583 0.00 0.00 2 727 0.28 1.37 2.63 0 0 0 0 . 1 . 001 nuclear build core . protein 5.99 5.99 5 123 8 104 4 4 119 127 0 522 0.00 0.00 3 649 0.46 1.53 2.42 0 0 0 0 . 1 . 002 nuclear build core . protein 3.49 3.49 1 123 9 104 1 5 121 127 0 522 0.00 0.00 1 649 0.15 0.76 2.18 0 0 0 0 . 1 . 003 nuclear build core . protein 5.49 5.49 3 123 11 104 0 5 122 127 0 522 0.00 0.00 1 649 0.15 0.76 2.34 0 0 0 0 . 1 . 004 nuclear build core . protein 4.99 4.99 5 123 11 104 3 6 118 127 0 522 0.00 0.00 2 649 0.31 1.53 2.49 0 0 0 0 . 1 . 005 nuclear build core . protein 3.00 3.00 3 123 11 104 1 7 119 127 0 522 0.00 0.00 1 649 0.15 0.76 2.29 0 0 0 0 . 1 . 006 nuclear build core . protein 6.49 6.49 3 123 11 104 1 3 123 127 0 522 0.00 0.00 1 649 0.15 0.76 2.33 0 0 0 0 . 1 . 007 nuclear build core . protein 4.99 4.99 4 123 12 104 2 4 121 127 0 522 0.00 0.00 1 649 0.15 0.76 2.40 0 0 0 0 . 1 . 008 nuclear build core . protein 4.99 4.99 2 123 6 104 1 5 121 127 0 522 0.00 0.00 1 649 0.15 0.76 2.17 0 0 0 0 . 1 . 009 nuclear build core . protein 6.99 6.99 2 123 9 104 2 4 121 127 0 522 0.00 0.00 1 649 0.15 0.76 2.43 0 0 0 0 . 1 . 010 nuclear build core . protein 3.49 3.49 4 123 10 104 1 4 122 127 0 522 0.00 0.00 1 649 0.15 0.76 2.16 0 0 0 0 . 1 . 011 nuclear build core . protein 6.99 6.99 3 123 8 104 3 5 119 127 0 522 0.00 0.00 3 649 0.46 2.29 2.47 0 0 0 0 . 1 . 012 nuclear build core . protein 8.49 8.49 2 123 8 104 3 5 119 127 0 522 0.00 0.00 2 649 0.31 1.53 2.55 0 0 0 0 . 1 . 013 nuclear build core . protein 8.99 8.99 3 123 10 104 0 5 122 127 0 522 0.00 0.00 1 649 0.15 0.76 2.50 0 0 0 0 . 1 . 014 nuclear build core . protein 5.49 5.49 2 123 14 104 2 4 121 127 0 522 0.00 0.00 3 649 0.46 2.29 2.48 0 0 0 0 . 1 . 015 nuclear build core . protein 4.99 4.99 3 123 11 104 3 5 119 127 0 522 0.00 0.00 1 649 0.15 0.76 2.46 0 0 0 0 . 1 . 001 nuclear build full . protein 5.63 5.63 5 138 10 117 4 6 134 144 0 583 0.00 0.00 3 727 0.41 1.37 2.46 0 0 0 0 . 1 . 002 nuclear build full . protein 3.03 3.03 1 138 10 117 1 6 137 144 0 583 0.00 0.00 1 727 0.14 0.68 2.14 0 0 0 0 . 1 . 003 nuclear build full . protein 4.76 4.76 3 138 12 117 0 8 136 144 0 583 0.00 0.00 1 727 0.14 0.68 2.39 0 0 0 0 . 1 . 004 nuclear build full . protein 4.33 4.33 5 138 13 117 3 9 132 144 0 583 0.00 0.00 2 727 0.28 1.37 2.50 0 0 0 0 . 1 . 005 nuclear build full . protein 3.46 3.46 3 138 12 117 2 9 133 144 0 583 0.00 0.00 3 727 0.41 2.05 2.38 0 0 0 0 . 1 . 006 nuclear build full . protein 5.63 5.63 3 138 11 117 1 5 138 144 0 583 0.00 0.00 1 727 0.14 0.68 2.33 0 0 0 0 . 1 . 007 nuclear build full . protein 4.33 4.33 4 138 13 117 5 5 134 144 0 583 0.00 0.00 2 727 0.28 1.37 2.45 0 0 0 0 . 1 . 008 nuclear build full . protein 4.76 4.76 3 138 8 117 3 8 133 144 0 583 0.00 0.00 1 727 0.14 0.68 2.35 0 0 0 0 . 1 . 009 nuclear build full . protein 6.06 6.06 2 138 11 117 2 7 135 144 0 583 0.00 0.00 1 727 0.14 0.68 2.49 0 0 0 0 . 1 . 010 nuclear build full . protein 3.46 3.46 4 138 11 117 2 11 131 144 0 583 0.00 0.00 1 727 0.14 0.68 2.40 0 0 0 0 . 1 . 011 nuclear build full . protein 6.06 6.06 3 138 8 117 3 8 133 144 0 583 0.00 0.00 3 727 0.41 2.05 2.44 0 0 0 0 . 1 . 012 nuclear build full . protein 7.80 7.80 3 138 11 117 5 7 132 144 0 583 0.00 0.00 5 727 0.69 2.74 2.66 0 0 0 0 . 1 . 013 nuclear build full . protein 9.96 9.96 3 138 12 117 1 9 134 144 0 583 0.00 0.00 3 727 0.41 2.05 2.73 0 0 0 0 . 1 . 014 nuclear build full . protein 6.93 6.93 2 138 16 117 2 9 133 144 0 583 0.00 0.00 7 727 0.96 4.79 2.72 0 0 0 0 . 1 . 015 nuclear build full . protein 6.93 6.93 4 138 15 117 4 10 130 144 0 583 0.00 0.00 2 727 0.28 1.37 2.76 0 0 0 0 . 1 . 001 nuclear nobuild core . protein 5.99 5.99 5 123 8 104 4 4 119 127 0 522 0.00 0.00 3 649 0.46 1.53 2.42 0 0 0 0 . 1 . 002 nuclear nobuild core . protein 3.49 3.49 1 123 9 104 1 5 121 127 0 522 0.00 0.00 1 649 0.15 0.76 2.18 0 0 0 0 . 1 . 003 nuclear nobuild core . protein 5.49 5.49 3 123 11 104 0 5 122 127 0 522 0.00 0.00 1 649 0.15 0.76 2.34 0 0 0 0 . 1 . 004 nuclear nobuild core . protein 4.99 4.99 5 123 11 104 3 6 118 127 0 522 0.00 0.00 2 649 0.31 1.53 2.49 0 0 0 0 . 1 . 005 nuclear nobuild core . protein 3.00 3.00 3 123 11 104 1 7 119 127 0 522 0.00 0.00 1 649 0.15 0.76 2.29 0 0 0 0 . 1 . 006 nuclear nobuild core . protein 6.49 6.49 3 123 11 104 1 3 123 127 0 522 0.00 0.00 1 649 0.15 0.76 2.33 0 0 0 0 . 1 . 007 nuclear nobuild core . protein 4.99 4.99 4 123 12 104 2 4 121 127 0 522 0.00 0.00 1 649 0.15 0.76 2.40 0 0 0 0 . 1 . 008 nuclear nobuild core . protein 4.99 4.99 2 123 6 104 1 5 121 127 0 522 0.00 0.00 1 649 0.15 0.76 2.17 0 0 0 0 . 1 . 009 nuclear nobuild core . protein 6.99 6.99 2 123 9 104 2 4 121 127 0 522 0.00 0.00 1 649 0.15 0.76 2.43 0 0 0 0 . 1 . 010 nuclear nobuild core . protein 3.49 3.49 4 123 10 104 1 4 122 127 0 522 0.00 0.00 1 649 0.15 0.76 2.16 0 0 0 0 . 1 . 011 nuclear nobuild core . protein 6.99 6.99 3 123 8 104 3 5 119 127 0 522 0.00 0.00 3 649 0.46 2.29 2.47 0 0 0 0 . 1 . 012 nuclear nobuild core . protein 8.49 8.49 2 123 8 104 3 5 119 127 0 522 0.00 0.00 2 649 0.31 1.53 2.55 0 0 0 0 . 1 . 013 nuclear nobuild core . protein 8.99 8.99 3 123 10 104 0 5 122 127 0 522 0.00 0.00 1 649 0.15 0.76 2.50 0 0 0 0 . 1 . 014 nuclear nobuild core . protein 5.49 5.49 2 123 14 104 2 4 121 127 0 522 0.00 0.00 3 649 0.46 2.29 2.48 0 0 0 0 . 1 . 015 nuclear nobuild core . protein 4.99 4.99 3 123 11 104 3 5 119 127 0 522 0.00 0.00 1 649 0.15 0.76 2.46 0 0 0 0 . 1 . 001 nuclear nobuild full . protein 5.63 5.63 5 138 10 117 4 6 134 144 0 583 0.00 0.00 3 727 0.41 1.37 2.46 0 0 0 0 . 1 . 002 nuclear nobuild full . protein 3.03 3.03 1 138 10 117 1 6 137 144 0 583 0.00 0.00 1 727 0.14 0.68 2.14 0 0 0 0 . 1 . 003 nuclear nobuild full . protein 4.76 4.76 3 138 12 117 0 8 136 144 0 583 0.00 0.00 1 727 0.14 0.68 2.39 0 0 0 0 . 1 . 004 nuclear nobuild full . protein 4.33 4.33 5 138 13 117 3 9 132 144 0 583 0.00 0.00 2 727 0.28 1.37 2.50 0 0 0 0 . 1 . 005 nuclear nobuild full . protein 3.46 3.46 3 138 12 117 2 9 133 144 0 583 0.00 0.00 3 727 0.41 2.05 2.38 0 0 0 0 . 1 . 006 nuclear nobuild full . protein 5.63 5.63 3 138 11 117 1 5 138 144 0 583 0.00 0.00 1 727 0.14 0.68 2.33 0 0 0 0 . 1 . 007 nuclear nobuild full . protein 4.33 4.33 4 138 13 117 5 5 134 144 0 583 0.00 0.00 2 727 0.28 1.37 2.45 0 0 0 0 . 1 . 008 nuclear nobuild full . protein 4.76 4.76 3 138 8 117 3 8 133 144 0 583 0.00 0.00 1 727 0.14 0.68 2.35 0 0 0 0 . 1 . 009 nuclear nobuild full . protein 6.06 6.06 2 138 11 117 2 7 135 144 0 583 0.00 0.00 1 727 0.14 0.68 2.49 0 0 0 0 . 1 . 010 nuclear nobuild full . protein 3.46 3.46 4 138 11 117 2 11 131 144 0 583 0.00 0.00 1 727 0.14 0.68 2.40 0 0 0 0 . 1 . 011 nuclear nobuild full . protein 6.06 6.06 3 138 8 117 3 8 133 144 0 583 0.00 0.00 3 727 0.41 2.05 2.44 0 0 0 0 . 1 . 012 nuclear nobuild full . protein 7.80 7.80 3 138 11 117 5 7 132 144 0 583 0.00 0.00 5 727 0.69 2.74 2.66 0 0 0 0 . 1 . 013 nuclear nobuild full . protein 9.96 9.96 3 138 12 117 1 9 134 144 0 583 0.00 0.00 3 727 0.41 2.05 2.73 0 0 0 0 . 1 . 014 nuclear nobuild full . protein 6.93 6.93 2 138 16 117 2 9 133 144 0 583 0.00 0.00 7 727 0.96 4.79 2.72 0 0 0 0 . 1 . 015 nuclear nobuild full . protein 6.93 6.93 4 138 15 117 4 10 130 144 0 583 0.00 0.00 2 727 0.28 1.37 2.76 0 0 0 0 . 1 stop_ save_