data_1yfv_residue save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 1yfv _Structure_validation_residue.Date_analyzed 2016-10-07 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 nuclear orig full ' A' A ' 1' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.438 2.028 0 C3'-C2'-C1' 99.922 -1.753 . 0.0 '__' . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear orig full ' A' A ' 2' ' ' ' G' . . . . . 0.415 ' C2 ' ' C2 ' ' A' ' 3' ' ' ' C' . . . . . . . . 0 O4'--C1' 1.441 2.232 0 C3'-C2'-C1' 100.284 -1.351 . 0.483 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 3' ' ' ' C' . . . . . 0.483 " O5'" ' H6 ' ' A' ' 3' ' ' ' C' . . . . . . . . 0 O4'--C1' 1.443 2.378 0 O4'-C4'-C3' 103.606 -1.353 . 0.569 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 4' ' ' ' G' . . . . . 0.465 ' N2 ' ' N7 ' ' B' ' 13' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.442 2.293 0 O4'-C4'-C3' 103.645 -1.325 . 0.407 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 5' ' ' ' A' . . . . . 0.477 " O5'" ' H8 ' ' A' ' 5' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.44 2.168 0 C3'-C2'-C1' 100.07 -1.589 . 0.523 &a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 6' ' ' ' G' . . . . . 0.439 " O4'" " H2'" ' A' ' 5' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.444 2.471 0 O4'-C4'-C3' 103.455 -1.461 . 0.46 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 7' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.441 2.246 0 O4'-C4'-C3' 103.651 -1.321 . 0.648 1a . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear orig full ' A' A ' 8' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.439 2.062 0 C4'-C3'-C2' 100.248 -2.452 . 0.787 1a . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear orig full ' B' B ' 9' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.439 2.042 0 C3'-C2'-C1' 99.903 -1.775 . 0.0 '__' . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear orig full ' B' B ' 10' ' ' ' G' . . . . . 0.422 ' C2 ' ' C2 ' ' B' ' 11' ' ' ' C' . . . . . . . . 0 O4'--C1' 1.441 2.279 0 C3'-C2'-C1' 100.267 -1.37 . 0.483 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 11' ' ' ' C' . . . . . 0.494 ' H6 ' " O5'" ' B' ' 11' ' ' ' C' . . . . . . . . 0 O4'--C1' 1.442 2.318 0 O4'-C4'-C3' 103.576 -1.375 . 0.571 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 12' ' ' ' G' . . . . . 0.451 ' N2 ' ' N7 ' ' A' ' 5' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.441 2.281 0 O4'-C4'-C3' 103.618 -1.344 . 0.406 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 13' ' ' ' A' . . . . . 0.482 " O5'" ' H8 ' ' B' ' 13' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.439 2.078 0 C3'-C2'-C1' 100.033 -1.63 . 0.521 &a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 14' ' ' ' G' . . . . . 0.437 " O4'" " H2'" ' B' ' 13' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.443 2.413 0 O4'-C4'-C3' 103.415 -1.489 . 0.459 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 15' ' ' ' C' . . . . . 0.406 ' H6 ' " O5'" ' B' ' 15' ' ' ' C' . . . . . . . . 0 O4'--C1' 1.442 2.346 0 O4'-C4'-C3' 103.651 -1.321 . 0.649 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' B' B ' 16' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.438 2.003 0 C4'-C3'-C2' 100.295 -2.405 . 0.789 1a . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear build full ' A' A ' 1' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.438 2.028 0 C3'-C2'-C1' 99.922 -1.753 . 0.0 '__' . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear build full ' A' A ' 2' ' ' ' G' . . . . . 0.415 ' C2 ' ' C2 ' ' A' ' 3' ' ' ' C' . . . . . . . . 0 O4'--C1' 1.441 2.232 0 C3'-C2'-C1' 100.284 -1.351 . 0.483 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 3' ' ' ' C' . . . . . 0.472 " O5'" ' H6 ' ' A' ' 3' ' ' ' C' . . . . . . . . 0 O4'--C1' 1.443 2.378 0 O4'-C4'-C3' 103.606 -1.353 . 0.569 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 4' ' ' ' G' . . . . . 0.465 ' N2 ' ' N7 ' ' B' ' 13' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.442 2.293 0 O4'-C4'-C3' 103.645 -1.325 . 0.407 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 5' ' ' ' A' . . . . . 0.5 ' N7 ' ' N2 ' ' B' ' 12' ' ' ' G' . . . . . . . . 0 O4'--C1' 1.44 2.168 0 C3'-C2'-C1' 100.07 -1.589 . 0.523 &a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 6' ' ' ' G' . . . . . 0.42 " O4'" " H2'" ' A' ' 5' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.444 2.471 0 O4'-C4'-C3' 103.455 -1.461 . 0.46 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 7' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.441 2.246 0 O4'-C4'-C3' 103.651 -1.321 . 0.648 1a . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear build full ' A' A ' 8' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.439 2.062 0 C4'-C3'-C2' 100.248 -2.452 . 0.787 1a . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear build full ' B' B ' 9' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.439 2.042 0 C3'-C2'-C1' 99.903 -1.775 . 0.0 '__' . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear build full ' B' B ' 10' ' ' ' G' . . . . . 0.422 ' C2 ' ' C2 ' ' B' ' 11' ' ' ' C' . . . . . . . . 0 O4'--C1' 1.441 2.279 0 C3'-C2'-C1' 100.267 -1.37 . 0.483 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 11' ' ' ' C' . . . . . 0.484 " O5'" ' H6 ' ' B' ' 11' ' ' ' C' . . . . . . . . 0 O4'--C1' 1.442 2.318 0 O4'-C4'-C3' 103.576 -1.375 . 0.571 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 12' ' ' ' G' . . . . . 0.5 ' N2 ' ' N7 ' ' A' ' 5' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.441 2.281 0 O4'-C4'-C3' 103.618 -1.344 . 0.406 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 13' ' ' ' A' . . . . . 0.474 " O5'" ' H8 ' ' B' ' 13' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.439 2.078 0 C3'-C2'-C1' 100.033 -1.63 . 0.521 &a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 14' ' ' ' G' . . . . . 0.42 " O4'" " H2'" ' B' ' 13' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.443 2.413 0 O4'-C4'-C3' 103.415 -1.489 . 0.459 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' B' B ' 15' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.442 2.346 0 O4'-C4'-C3' 103.651 -1.321 . 0.649 1a . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear build full ' B' B ' 16' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.438 2.003 0 C4'-C3'-C2' 100.295 -2.405 . 0.789 1a . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear nobuild full ' A' A ' 1' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.438 2.028 0 C3'-C2'-C1' 99.922 -1.753 . 0.0 '__' . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear nobuild full ' A' A ' 2' ' ' ' G' . . . . . 0.415 ' C2 ' ' C2 ' ' A' ' 3' ' ' ' C' . . . . . . . . 0 O4'--C1' 1.441 2.232 0 C3'-C2'-C1' 100.284 -1.351 . 0.483 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 3' ' ' ' C' . . . . . 0.472 " O5'" ' H6 ' ' A' ' 3' ' ' ' C' . . . . . . . . 0 O4'--C1' 1.443 2.378 0 O4'-C4'-C3' 103.606 -1.353 . 0.569 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 4' ' ' ' G' . . . . . 0.465 ' N2 ' ' N7 ' ' B' ' 13' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.442 2.293 0 O4'-C4'-C3' 103.645 -1.325 . 0.407 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 5' ' ' ' A' . . . . . 0.5 ' N7 ' ' N2 ' ' B' ' 12' ' ' ' G' . . . . . . . . 0 O4'--C1' 1.44 2.168 0 C3'-C2'-C1' 100.07 -1.589 . 0.523 &a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 6' ' ' ' G' . . . . . 0.42 " O4'" " H2'" ' A' ' 5' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.444 2.471 0 O4'-C4'-C3' 103.455 -1.461 . 0.46 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 7' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.441 2.246 0 O4'-C4'-C3' 103.651 -1.321 . 0.648 1a . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear nobuild full ' A' A ' 8' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.439 2.062 0 C4'-C3'-C2' 100.248 -2.452 . 0.787 1a . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear nobuild full ' B' B ' 9' ' ' ' G' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.439 2.042 0 C3'-C2'-C1' 99.903 -1.775 . 0.0 '__' . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear nobuild full ' B' B ' 10' ' ' ' G' . . . . . 0.422 ' C2 ' ' C2 ' ' B' ' 11' ' ' ' C' . . . . . . . . 0 O4'--C1' 1.441 2.279 0 C3'-C2'-C1' 100.267 -1.37 . 0.483 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 11' ' ' ' C' . . . . . 0.484 " O5'" ' H6 ' ' B' ' 11' ' ' ' C' . . . . . . . . 0 O4'--C1' 1.442 2.318 0 O4'-C4'-C3' 103.576 -1.375 . 0.571 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 12' ' ' ' G' . . . . . 0.5 ' N2 ' ' N7 ' ' A' ' 5' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.441 2.281 0 O4'-C4'-C3' 103.618 -1.344 . 0.406 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 13' ' ' ' A' . . . . . 0.474 " O5'" ' H8 ' ' B' ' 13' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.439 2.078 0 C3'-C2'-C1' 100.033 -1.63 . 0.521 &a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 14' ' ' ' G' . . . . . 0.42 " O4'" " H2'" ' B' ' 13' ' ' ' A' . . . . . . . . 0 O4'--C1' 1.443 2.413 0 O4'-C4'-C3' 103.415 -1.489 . 0.459 1a . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' B' B ' 15' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.442 2.346 0 O4'-C4'-C3' 103.651 -1.321 . 0.649 1a . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear nobuild full ' B' B ' 16' ' ' ' C' . . . . . . . . . . . . . . . . . . . . 0 O4'--C1' 1.438 2.003 0 C4'-C3'-C2' 100.295 -2.405 . 0.789 1a . 0.0 . . . . . . . . . . 0 0 . 1 stop_ save_