data_6nk4_residue ############################ # Computer software used # ############################ save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 6nk4 _Structure_validation_residue.Date_analyzed 2020-01-10 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 ecloud orig full ' A' A ' 1' ' ' LYS . . . . . . . . . . . . . 23.8 ttmt . . . . . 0 N--CA 1.49 1.539 0 CA-C-O 119.561 -0.257 . . . . 28.18 110.36 . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 2' ' ' VAL . . . . . . . . . . . . . 25.9 t -114.05 120.55 64.14 Favored 'Isoleucine or valine' 0 N--CA 1.474 0.749 0 N-CA-C 104.491 -2.411 . . . . 11.73 104.491 163.908 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 3' ' ' GLN . . . . . . . . . . . . . 53.3 tt0 -149.91 142.02 24.01 Favored 'General case' 0 CA--C 1.502 -0.888 0 N-CA-C 114.132 1.16 . . . . 20.08 114.132 -172.146 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 4' ' ' ILE . . . . . . . . . . . . . 90.3 mt -123.26 126.31 73.19 Favored 'Isoleucine or valine' 0 CA--C 1.496 -1.116 0 N-CA-C 106.177 -1.786 . . . . 7.62 106.177 170.97 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 5' ' ' ILE . . . . . . . . . . . . . 38.5 mt -111.66 110.95 34.09 Favored 'Isoleucine or valine' 0 CA--C 1.502 -0.878 0 N-CA-C 104.546 -2.391 . . . . 17.23 104.546 168.392 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 6' ' ' ASN . . . . . . . . . . . . . 57.7 t30 -122.34 128.21 50.73 Favored 'General case' 0 C--N 1.316 -0.866 0 N-CA-C 107.778 -1.193 . . . . 12.76 107.778 -176.243 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 7' ' ' LYS . . . . . . . . . . . . . 75.1 tttt -136.9 117.96 14.35 Favored 'General case' 0 C--N 1.313 -0.999 0 N-CA-C 107.514 -1.291 . . . . 47.29 107.514 -179.366 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 8' ' ' LYS . . . . . . . . . . . . . 88.2 tttt -112.65 130.83 55.9 Favored 'General case' 0 N--CA 1.446 -0.649 0 CA-C-N 115.21 -0.905 . . . . 51.32 108.706 175.236 . . . . . . . . 1 1 . 1 . 001 ecloud orig full ' A' A ' 9' ' ' LEU . . . . . . . . . . . . . 2.1 mt . . . . . 0 C--O 1.235 0.297 0 CA-C-N 115.363 -0.835 . . . . 47.35 109.257 179.863 . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 101' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 102' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud orig full ' A' A ' 103' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 1' ' ' LYS . . . . . . . . . . . . . 23.8 ttmt . . . . . 0 N--CA 1.49 1.539 0 CA-C-O 119.561 -0.257 . . . . 28.18 110.36 . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 2' ' ' VAL . . . . . . . . . . . . . 25.9 t -114.05 120.55 64.14 Favored 'Isoleucine or valine' 0 N--CA 1.474 0.749 0 N-CA-C 104.491 -2.411 . . . . 11.73 104.491 163.908 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 3' ' ' GLN . . . . . . . . . . . . . 53.3 tt0 -149.91 142.02 24.01 Favored 'General case' 0 CA--C 1.502 -0.888 0 N-CA-C 114.132 1.16 . . . . 20.079999999999998 114.132 -172.146 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 4' ' ' ILE . . . . . . . . . . . . . 90.3 mt -123.26 126.31 73.19 Favored 'Isoleucine or valine' 0 CA--C 1.496 -1.116 0 N-CA-C 106.177 -1.786 . . . . 7.6200000000000001 106.177 170.97 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 5' ' ' ILE . . . . . . . . . . . . . 38.5 mt -111.66 110.95 34.09 Favored 'Isoleucine or valine' 0 CA--C 1.502 -0.878 0 N-CA-C 104.546 -2.391 . . . . 17.23 104.546 168.392 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 6' ' ' ASN . . . . . . . . . . . . . 57.7 t30 -122.34 128.21 50.73 Favored 'General case' 0 C--N 1.316 -0.866 0 N-CA-C 107.778 -1.193 . . . . 12.76 107.778 -176.243 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 7' ' ' LYS . . . . . . . . . . . . . 75.1 tttt -136.9 117.96 14.35 Favored 'General case' 0 C--N 1.313 -0.999 0 N-CA-C 107.514 -1.291 . . . . 47.289999999999999 107.514 -179.366 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 8' ' ' LYS . . . . . . . . . . . . . 88.2 tttt -112.65 130.83 55.9 Favored 'General case' 0 N--CA 1.446 -0.649 0 CA-C-N 115.21 -0.905 . . . . 51.32 108.706 175.236 . . . . . . . . 1 1 . 1 . 001 ecloud build full ' A' A ' 9' ' ' LEU . . . . . . . . . . . . . 2.1 mt . . . . . 0 C--O 1.235 0.297 0 CA-C-N 115.363 -0.835 . . . . 47.350000000000001 109.257 179.863 . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 101' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 102' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud build full ' A' A ' 103' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 1' ' ' LYS . . . . . . . . . . . . . 23.8 ttmt . . . . . 0 N--CA 1.49 1.539 0 CA-C-O 119.561 -0.257 . . . . 28.18 110.36 . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 2' ' ' VAL . . . . . . . . . . . . . 25.9 t -114.05 120.55 64.14 Favored 'Isoleucine or valine' 0 N--CA 1.474 0.749 0 N-CA-C 104.491 -2.411 . . . . 11.73 104.491 163.908 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 3' ' ' GLN . . . . . . . . . . . . . 53.3 tt0 -149.91 142.02 24.01 Favored 'General case' 0 CA--C 1.502 -0.888 0 N-CA-C 114.132 1.16 . . . . 20.08 114.132 -172.146 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 4' ' ' ILE . . . . . . . . . . . . . 90.3 mt -123.26 126.31 73.19 Favored 'Isoleucine or valine' 0 CA--C 1.496 -1.116 0 N-CA-C 106.177 -1.786 . . . . 7.62 106.177 170.97 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 5' ' ' ILE . . . . . . . . . . . . . 38.5 mt -111.66 110.95 34.09 Favored 'Isoleucine or valine' 0 CA--C 1.502 -0.878 0 N-CA-C 104.546 -2.391 . . . . 17.23 104.546 168.392 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 6' ' ' ASN . . . . . . . . . . . . . 57.7 t30 -122.34 128.21 50.73 Favored 'General case' 0 C--N 1.316 -0.866 0 N-CA-C 107.778 -1.193 . . . . 12.76 107.778 -176.243 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 7' ' ' LYS . . . . . . . . . . . . . 75.1 tttt -136.9 117.96 14.35 Favored 'General case' 0 C--N 1.313 -0.999 0 N-CA-C 107.514 -1.291 . . . . 47.29 107.514 -179.366 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 8' ' ' LYS . . . . . . . . . . . . . 88.2 tttt -112.65 130.83 55.9 Favored 'General case' 0 N--CA 1.446 -0.649 0 CA-C-N 115.21 -0.905 . . . . 51.32 108.706 175.236 . . . . . . . . 1 1 . 1 . 001 ecloud nobuild full ' A' A ' 9' ' ' LEU . . . . . . . . . . . . . 2.1 mt . . . . . 0 C--O 1.235 0.297 0 CA-C-N 115.363 -0.835 . . . . 47.35 109.257 179.863 . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 101' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 102' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 ecloud nobuild full ' A' A ' 103' ' ' HOH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 stop_ save_