data_1djf_residue save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 1djf _Structure_validation_residue.Date_analyzed 2016-10-06 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 nuclear orig full ' A' A ' 1' ' ' GLN . . . . . . . . . . . . . 0.0 OUTLIER . . . . . 0 N--CA 1.496 1.862 0 CA-C-O 121.127 0.489 . . . . 6.47 110.341 . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 2' ' ' ALA . . . . . . . . . . . . . . . -152.18 98.52 2.92 Favored Pre-proline 0 N--CA 1.494 1.751 0 O-C-N 121.5 -0.75 . . . . 3.45 110.227 179.975 . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 3' ' ' PRO . . . . . . . . . . . . . 52.1 Cg_endo -76.73 61.65 7.02 Favored 'Trans proline' 0 C--N 1.312 -1.354 0 O-C-N 123.981 1.516 . . . . 3.74 110.796 179.959 . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 4' ' ' ALA . . . . . . . . . . . . . . . -63.66 -43.22 97.35 Favored 'General case' 0 N--CA 1.498 1.937 0 O-C-N 121.309 -0.87 . . . . 2.04 110.298 179.891 . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 5' ' ' TYR . . . . . . . . . . . . . 33.3 p90 -62.57 -32.31 73.27 Favored 'General case' 0 N--CA 1.498 1.925 0 O-C-N 121.543 -0.723 . . . . 4.27 110.1 179.578 . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 6' ' ' LYS . . . . . . . . . . . . . 21.0 ttmt -65.75 -41.0 92.66 Favored 'General case' 0 N--CA 1.494 1.768 0 O-C-N 121.375 -0.828 . . . . 4.99 109.278 178.949 . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 7' ' ' LYS . . . . . . . . . . . . . 6.4 tttp -66.83 -36.37 82.2 Favored 'General case' 0 N--CA 1.494 1.769 0 O-C-N 121.619 -0.676 . . . . 3.9 109.654 178.969 . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 8' ' ' ALA . . . . . . . . . . . . . . . -66.08 -39.96 90.44 Favored 'General case' 0 N--CA 1.496 1.828 0 O-C-N 121.472 -0.767 . . . . 1.45 109.819 179.296 . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 9' ' ' ALA . . . . . . . . . . . . . . . -65.43 -39.05 91.63 Favored 'General case' 0 N--CA 1.496 1.854 0 O-C-N 121.617 -0.677 . . . . 1.78 110.2 179.422 . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 10' ' ' LYS . . . . . . . . . . . . . 6.0 tttt -64.97 -33.4 75.94 Favored 'General case' 0 N--CA 1.499 1.978 0 O-C-N 121.507 -0.745 . . . . 3.76 110.375 179.573 . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 11' ' ' LYS . . . . . . . . . . . . . 20.7 tttt -74.69 -36.7 62.76 Favored 'General case' 0 N--CA 1.495 1.824 0 O-C-N 121.602 -0.686 . . . . 4.61 110.003 179.547 . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 12' ' ' LEU . . . . . . . . . . . . . 7.4 tp -69.47 -25.42 64.07 Favored 'General case' 0 N--CA 1.498 1.933 0 O-C-N 121.452 -0.78 . . . . 2.83 110.67 179.584 . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 13' ' ' ALA . . . . . . . . . . . . . . . -84.09 -34.08 24.24 Favored 'General case' 0 N--CA 1.496 1.853 0 O-C-N 121.289 -0.882 . . . . 1.51 110.443 179.946 . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 14' ' ' GLU . . . . . . . . . . . . . 46.2 mt-10 -91.1 -51.39 5.35 Favored 'General case' 0 N--CA 1.497 1.886 0 O-C-N 121.462 -0.774 . . . . 3.67 110.336 -179.91 . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 15' ' ' SER . . . . . . . . . . . . . 1.3 m . . . . . 0 N--CA 1.497 1.886 0 CA-C-O 117.889 -1.053 . . . . 3.73 110.537 -179.654 . . . . . . . . 0 0 . 1 . 001 nuclear build full ' A' A ' 1' ' ' GLN . . . . . . . . . . . . . 0.0 OUTLIER . . . . . 0 N--CA 1.496 1.862 0 CA-C-O 121.127 0.489 . . . . 5.7599999999999998 110.341 . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 2' ' ' ALA . . . . . . . . . . . . . . . -152.18 98.52 2.92 Favored Pre-proline 0 N--CA 1.494 1.751 0 O-C-N 121.5 -0.75 . . . . 2.9500000000000002 110.227 179.975 . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 3' ' ' PRO . . . . . . . . . . . . . 52.1 Cg_endo -76.73 61.65 7.02 Favored 'Trans proline' 0 C--N 1.312 -1.354 0 O-C-N 123.981 1.516 . . . . 3.1200000000000001 110.796 179.959 . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 4' ' ' ALA . . . . . . . . . . . . . . . -63.66 -43.22 97.35 Favored 'General case' 0 N--CA 1.498 1.937 0 O-C-N 121.309 -0.87 . . . . 1.45 110.298 179.891 . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 5' ' ' TYR . . . . . . . . . . . . . 33.3 p90 -62.57 -32.31 73.27 Favored 'General case' 0 N--CA 1.498 1.925 0 O-C-N 121.543 -0.723 . . . . 3.9100000000000001 110.1 179.578 . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 6' ' ' LYS . . . . . . . . . . . . . 21.0 ttmt -65.75 -41.0 92.66 Favored 'General case' 0 N--CA 1.494 1.768 0 O-C-N 121.375 -0.828 . . . . 4.5999999999999996 109.278 178.949 . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 7' ' ' LYS . . . . . . . . . . . . . 6.4 tttp -66.83 -36.37 82.2 Favored 'General case' 0 N--CA 1.494 1.769 0 O-C-N 121.619 -0.676 . . . . 3.5800000000000001 109.654 178.969 . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 8' ' ' ALA . . . . . . . . . . . . . . . -66.08 -39.96 90.44 Favored 'General case' 0 N--CA 1.496 1.828 0 O-C-N 121.472 -0.767 . . . . 0.94999999999999996 109.819 179.296 . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 9' ' ' ALA . . . . . . . . . . . . . . . -65.43 -39.05 91.63 Favored 'General case' 0 N--CA 1.496 1.854 0 O-C-N 121.617 -0.677 . . . . 1.27 110.2 179.422 . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 10' ' ' LYS . . . . . . . . . . . . . 6.0 tttt -64.97 -33.4 75.94 Favored 'General case' 0 N--CA 1.499 1.978 0 O-C-N 121.507 -0.745 . . . . 3.4199999999999999 110.375 179.573 . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 11' ' ' LYS . . . . . . . . . . . . . 20.7 tttt -74.69 -36.7 62.76 Favored 'General case' 0 N--CA 1.495 1.824 0 O-C-N 121.602 -0.686 . . . . 4.0700000000000003 110.003 179.547 . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 12' ' ' LEU . . . . . . . . . . . . . 7.4 tp -69.47 -25.42 64.07 Favored 'General case' 0 N--CA 1.498 1.933 0 O-C-N 121.452 -0.78 . . . . 2.2999999999999998 110.67 179.584 . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 13' ' ' ALA . . . . . . . . . . . . . . . -84.09 -34.08 24.24 Favored 'General case' 0 N--CA 1.496 1.853 0 O-C-N 121.289 -0.882 . . . . 0.98999999999999999 110.443 179.946 . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 14' ' ' GLU . . . . . . . . . . . . . 46.2 mt-10 -91.1 -51.39 5.35 Favored 'General case' 0 N--CA 1.497 1.886 0 O-C-N 121.462 -0.774 . . . . 3.6699999999999999 110.336 -179.91 . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 15' ' ' SER . . . . . . . . . . . . . 1.3 m . . . . . 0 N--CA 1.497 1.886 0 CA-C-O 117.889 -1.053 . . . . 3.48 110.537 -179.654 . . . . . . . . 0 0 . 1 . 001 nuclear nobuild full ' A' A ' 1' ' ' GLN . . . . . . . . . . . . . 0.0 OUTLIER . . . . . 0 N--CA 1.496 1.862 0 CA-C-O 121.127 0.489 . . . . 5.7599999999999998 110.341 . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 2' ' ' ALA . . . . . . . . . . . . . . . -152.18 98.52 2.92 Favored Pre-proline 0 N--CA 1.494 1.751 0 O-C-N 121.5 -0.75 . . . . 2.9500000000000002 110.227 179.975 . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 3' ' ' PRO . . . . . . . . . . . . . 52.1 Cg_endo -76.73 61.65 7.02 Favored 'Trans proline' 0 C--N 1.312 -1.354 0 O-C-N 123.981 1.516 . . . . 3.1200000000000001 110.796 179.959 . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 4' ' ' ALA . . . . . . . . . . . . . . . -63.66 -43.22 97.35 Favored 'General case' 0 N--CA 1.498 1.937 0 O-C-N 121.309 -0.87 . . . . 1.45 110.298 179.891 . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 5' ' ' TYR . . . . . . . . . . . . . 33.3 p90 -62.57 -32.31 73.27 Favored 'General case' 0 N--CA 1.498 1.925 0 O-C-N 121.543 -0.723 . . . . 3.9100000000000001 110.1 179.578 . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 6' ' ' LYS . . . . . . . . . . . . . 21.0 ttmt -65.75 -41.0 92.66 Favored 'General case' 0 N--CA 1.494 1.768 0 O-C-N 121.375 -0.828 . . . . 4.5999999999999996 109.278 178.949 . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 7' ' ' LYS . . . . . . . . . . . . . 6.4 tttp -66.83 -36.37 82.2 Favored 'General case' 0 N--CA 1.494 1.769 0 O-C-N 121.619 -0.676 . . . . 3.5800000000000001 109.654 178.969 . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 8' ' ' ALA . . . . . . . . . . . . . . . -66.08 -39.96 90.44 Favored 'General case' 0 N--CA 1.496 1.828 0 O-C-N 121.472 -0.767 . . . . 0.94999999999999996 109.819 179.296 . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 9' ' ' ALA . . . . . . . . . . . . . . . -65.43 -39.05 91.63 Favored 'General case' 0 N--CA 1.496 1.854 0 O-C-N 121.617 -0.677 . . . . 1.27 110.2 179.422 . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 10' ' ' LYS . . . . . . . . . . . . . 6.0 tttt -64.97 -33.4 75.94 Favored 'General case' 0 N--CA 1.499 1.978 0 O-C-N 121.507 -0.745 . . . . 3.4199999999999999 110.375 179.573 . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 11' ' ' LYS . . . . . . . . . . . . . 20.7 tttt -74.69 -36.7 62.76 Favored 'General case' 0 N--CA 1.495 1.824 0 O-C-N 121.602 -0.686 . . . . 4.0700000000000003 110.003 179.547 . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 12' ' ' LEU . . . . . . . . . . . . . 7.4 tp -69.47 -25.42 64.07 Favored 'General case' 0 N--CA 1.498 1.933 0 O-C-N 121.452 -0.78 . . . . 2.2999999999999998 110.67 179.584 . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 13' ' ' ALA . . . . . . . . . . . . . . . -84.09 -34.08 24.24 Favored 'General case' 0 N--CA 1.496 1.853 0 O-C-N 121.289 -0.882 . . . . 0.98999999999999999 110.443 179.946 . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 14' ' ' GLU . . . . . . . . . . . . . 46.2 mt-10 -91.1 -51.39 5.35 Favored 'General case' 0 N--CA 1.497 1.886 0 O-C-N 121.462 -0.774 . . . . 3.6699999999999999 110.336 -179.91 . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 15' ' ' SER . . . . . . . . . . . . . 1.3 m . . . . . 0 N--CA 1.497 1.886 0 CA-C-O 117.889 -1.053 . . . . 3.48 110.537 -179.654 . . . . . . . . 0 0 . 1 stop_ save_