data_2d5u_oneline save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_oneline _Structure_validation_oneline.Sf_category structure_validation _Structure_validation_oneline.Sf_framecode Structure_validation_oneline _Structure_validation_oneline.Entry_ID ? _Structure_validation_oneline.List_ID 1 _Structure_validation_oneline.PDB_accession_code 2d5u _Structure_validation_oneline.Date_analyzed 2016-10-07 loop_ _Oneline_analysis_software.Software_ID _Oneline_analysis_software.Software_label _Oneline_analysis_software.Method_ID _Oneline_analysis_software.Method_label _Oneline_analysis_software.Entry_ID _Oneline_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Oneline_analysis.ID _Oneline_analysis.PDB_model_num _Oneline_analysis.Hydrogen_positions _Oneline_analysis.MolProbity_flips _Oneline_analysis.Cyrange_core_flag _Oneline_analysis.Assembly_ID _Oneline_analysis.Macromolecule_types _Oneline_analysis.Clashscore _Oneline_analysis.Clashscore_B_under_40 _Oneline_analysis.Cbeta_outlier_count _Oneline_analysis.Cbeta_count _Oneline_analysis.Rotamer_outlier_count _Oneline_analysis.Rotamer_count _Oneline_analysis.Ramachandran_outlier_count _Oneline_analysis.Ramachandran_allowed_count _Oneline_analysis.Ramachandran_favored_count _Oneline_analysis.Ramachandran_count _Oneline_analysis.Bond_outlier_count _Oneline_analysis.Bond_count _Oneline_analysis.Percent_bond_outlier _Oneline_analysis.Percent_residues_with_bond_outlier _Oneline_analysis.Angle_outlier_count _Oneline_analysis.Angle_count _Oneline_analysis.Percent_angle_outlier _Oneline_analysis.Percent_residues_with_angle_outlier _Oneline_analysis.MolProbity_score _Oneline_analysis.RNA_phosphate_perpendicular_outlier_count _Oneline_analysis.RNA_phosphate_perpendicular_count _Oneline_analysis.RNA_suite_outlier_count _Oneline_analysis.RNA_suite_count _Oneline_analysis.Entry_ID _Oneline_analysis.Structure_validation_oneline_list_ID . 001 nuclear orig core . protein 1.88 0.00 0 96 27 87 3 7 88 98 0 399 0.00 0.00 0 497 0.00 0.00 2.64 0 0 0 0 . 1 . 002 nuclear orig core . protein 2.51 2.49 0 96 31 87 2 8 88 98 0 399 0.00 0.00 0 497 0.00 0.00 2.77 0 0 0 0 . 1 . 003 nuclear orig core . protein 1.26 0.00 0 96 29 87 2 7 89 98 0 399 0.00 0.00 0 497 0.00 0.00 2.53 0 0 0 0 . 1 . 004 nuclear orig core . protein 2.51 1.25 0 96 31 87 2 7 89 98 0 399 0.00 0.00 0 497 0.00 0.00 2.74 0 0 0 0 . 1 . 005 nuclear orig core . protein 1.88 1.21 0 96 34 87 3 7 88 98 0 399 0.00 0.00 0 497 0.00 0.00 2.71 0 0 0 0 . 1 . 006 nuclear orig core . protein 1.88 0.00 0 96 32 87 1 9 88 98 0 399 0.00 0.00 0 497 0.00 0.00 2.69 0 0 0 0 . 1 . 007 nuclear orig core . protein 2.51 1.28 0 96 31 87 1 8 89 98 0 399 0.00 0.00 0 497 0.00 0.00 2.74 0 0 0 0 . 1 . 008 nuclear orig core . protein 1.88 0.00 0 96 27 87 3 8 87 98 0 399 0.00 0.00 0 497 0.00 0.00 2.66 0 0 0 0 . 1 . 009 nuclear orig core . protein 2.51 1.26 0 96 23 87 1 6 91 98 0 399 0.00 0.00 0 497 0.00 0.00 2.57 0 0 0 0 . 1 . 010 nuclear orig core . protein 1.88 0.00 0 96 23 87 3 10 85 98 0 399 0.00 0.00 0 497 0.00 0.00 2.66 0 0 0 0 . 1 . 001 nuclear orig full . protein 1.58 0.00 0 116 32 105 4 14 104 122 0 495 0.00 0.00 0 617 0.00 0.00 2.69 0 0 0 0 . 1 . 002 nuclear orig full . protein 2.11 2.11 0 116 39 105 5 20 97 122 0 495 0.00 0.00 0 617 0.00 0.00 2.92 0 0 0 0 . 1 . 003 nuclear orig full . protein 1.05 0.00 0 116 36 105 5 14 103 122 0 495 0.00 0.00 0 617 0.00 0.00 2.64 0 0 0 0 . 1 . 004 nuclear orig full . protein 2.11 1.05 0 116 39 105 3 15 104 122 0 495 0.00 0.00 0 617 0.00 0.00 2.83 0 0 0 0 . 1 . 005 nuclear orig full . protein 1.58 1.02 0 116 41 105 4 15 103 122 0 495 0.00 0.00 0 617 0.00 0.00 2.78 0 0 0 0 . 1 . 006 nuclear orig full . protein 1.58 0.00 0 116 37 105 4 20 98 122 0 495 0.00 0.00 0 617 0.00 0.00 2.81 0 0 0 0 . 1 . 007 nuclear orig full . protein 2.11 1.07 0 116 38 105 1 17 104 122 0 495 0.00 0.00 0 617 0.00 0.00 2.82 0 0 0 0 . 1 . 008 nuclear orig full . protein 1.58 0.00 0 116 35 105 4 16 102 122 0 495 0.00 0.00 0 617 0.00 0.00 2.74 0 0 0 0 . 1 . 009 nuclear orig full . protein 2.11 1.06 0 116 33 105 4 17 101 122 0 495 0.00 0.00 0 617 0.00 0.00 2.82 0 0 0 0 . 1 . 010 nuclear orig full . protein 1.58 0.00 0 116 30 105 5 14 103 122 0 495 0.00 0.00 0 617 0.00 0.00 2.68 0 0 0 0 . 1 . 001 nuclear build core . protein 23.87 17.35 0 96 27 87 3 7 88 98 0 399 0.00 0.00 0 497 0.00 0.00 3.56 0 0 0 0 . 1 . 002 nuclear build core . protein 28.89 16.03 0 96 31 87 2 8 88 98 0 399 0.00 0.00 0 497 0.00 0.00 3.68 0 0 0 0 . 1 . 003 nuclear build core . protein 23.24 7.70 0 96 30 87 2 7 89 98 0 399 0.00 0.00 0 497 0.00 0.00 3.55 0 0 0 0 . 1 . 004 nuclear build core . protein 21.98 13.04 0 96 31 87 2 7 89 98 0 399 0.00 0.00 0 497 0.00 0.00 3.54 0 0 0 0 . 1 . 005 nuclear build core . protein 20.73 8.15 0 96 34 87 3 7 88 98 0 399 0.00 0.00 0 497 0.00 0.00 3.57 0 0 0 0 . 1 . 006 nuclear build core . protein 27.64 14.07 0 96 33 87 1 9 88 98 0 399 0.00 0.00 0 497 0.00 0.00 3.68 0 0 0 0 . 1 . 007 nuclear build core . protein 24.50 15.11 0 96 32 87 1 8 89 98 0 399 0.00 0.00 0 497 0.00 0.00 3.59 0 0 0 0 . 1 . 008 nuclear build core . protein 23.24 20.59 0 96 28 87 3 8 87 98 0 399 0.00 0.00 0 497 0.00 0.00 3.58 0 0 0 0 . 1 . 009 nuclear build core . protein 21.98 9.62 0 96 23 87 1 6 91 98 0 399 0.00 0.00 0 497 0.00 0.00 3.37 0 0 0 0 . 1 . 010 nuclear build core . protein 22.61 16.80 0 96 24 87 3 10 85 98 0 399 0.00 0.00 0 497 0.00 0.00 3.57 0 0 0 0 . 1 . 001 nuclear build full . protein 20.00 14.88 0 116 32 105 4 14 104 122 0 495 0.00 0.00 0 617 0.00 0.00 3.58 0 0 0 0 . 1 . 002 nuclear build full . protein 25.26 13.46 0 116 39 105 5 20 97 122 0 495 0.00 0.00 0 617 0.00 0.00 3.83 0 0 0 0 . 1 . 003 nuclear build full . protein 20.53 6.39 0 116 37 105 5 14 103 122 0 495 0.00 0.00 0 617 0.00 0.00 3.65 0 0 0 0 . 1 . 004 nuclear build full . protein 20.00 12.14 0 116 39 105 3 15 104 122 0 495 0.00 0.00 0 617 0.00 0.00 3.64 0 0 0 0 . 1 . 005 nuclear build full . protein 21.05 9.83 0 116 41 105 4 15 103 122 0 495 0.00 0.00 0 617 0.00 0.00 3.70 0 0 0 0 . 1 . 006 nuclear build full . protein 25.26 13.89 0 116 38 105 4 20 98 122 0 495 0.00 0.00 0 617 0.00 0.00 3.81 0 0 0 0 . 1 . 007 nuclear build full . protein 21.05 13.82 0 116 39 105 1 17 104 122 0 495 0.00 0.00 0 617 0.00 0.00 3.66 0 0 0 0 . 1 . 008 nuclear build full . protein 19.47 17.17 0 116 36 105 4 16 102 122 0 495 0.00 0.00 0 617 0.00 0.00 3.63 0 0 0 0 . 1 . 009 nuclear build full . protein 19.47 9.23 0 116 33 105 4 17 101 122 0 495 0.00 0.00 0 617 0.00 0.00 3.62 0 0 0 0 . 1 . 010 nuclear build full . protein 20.53 16.27 0 116 31 105 5 14 103 122 0 495 0.00 0.00 0 617 0.00 0.00 3.59 0 0 0 0 . 1 . 001 nuclear nobuild core . protein 23.87 17.35 0 96 27 87 3 7 88 98 0 399 0.00 0.00 0 497 0.00 0.00 3.56 0 0 0 0 . 1 . 002 nuclear nobuild core . protein 28.89 16.03 0 96 31 87 2 8 88 98 0 399 0.00 0.00 0 497 0.00 0.00 3.68 0 0 0 0 . 1 . 003 nuclear nobuild core . protein 23.24 7.70 0 96 29 87 2 7 89 98 0 399 0.00 0.00 0 497 0.00 0.00 3.54 0 0 0 0 . 1 . 004 nuclear nobuild core . protein 21.98 13.04 0 96 31 87 2 7 89 98 0 399 0.00 0.00 0 497 0.00 0.00 3.54 0 0 0 0 . 1 . 005 nuclear nobuild core . protein 20.73 8.15 0 96 34 87 3 7 88 98 0 399 0.00 0.00 0 497 0.00 0.00 3.57 0 0 0 0 . 1 . 006 nuclear nobuild core . protein 27.64 14.07 0 96 32 87 1 9 88 98 0 399 0.00 0.00 0 497 0.00 0.00 3.67 0 0 0 0 . 1 . 007 nuclear nobuild core . protein 24.50 15.11 0 96 31 87 1 8 89 98 0 399 0.00 0.00 0 497 0.00 0.00 3.58 0 0 0 0 . 1 . 008 nuclear nobuild core . protein 23.24 20.59 0 96 27 87 3 8 87 98 0 399 0.00 0.00 0 497 0.00 0.00 3.57 0 0 0 0 . 1 . 009 nuclear nobuild core . protein 21.98 9.62 0 96 23 87 1 6 91 98 0 399 0.00 0.00 0 497 0.00 0.00 3.37 0 0 0 0 . 1 . 010 nuclear nobuild core . protein 22.61 16.80 0 96 23 87 3 10 85 98 0 399 0.00 0.00 0 497 0.00 0.00 3.55 0 0 0 0 . 1 . 001 nuclear nobuild full . protein 20.00 14.88 0 116 32 105 4 14 104 122 0 495 0.00 0.00 0 617 0.00 0.00 3.58 0 0 0 0 . 1 . 002 nuclear nobuild full . protein 25.26 13.46 0 116 39 105 5 20 97 122 0 495 0.00 0.00 0 617 0.00 0.00 3.83 0 0 0 0 . 1 . 003 nuclear nobuild full . protein 20.53 6.39 0 116 36 105 5 14 103 122 0 495 0.00 0.00 0 617 0.00 0.00 3.64 0 0 0 0 . 1 . 004 nuclear nobuild full . protein 20.00 12.14 0 116 39 105 3 15 104 122 0 495 0.00 0.00 0 617 0.00 0.00 3.64 0 0 0 0 . 1 . 005 nuclear nobuild full . protein 21.05 9.83 0 116 41 105 4 15 103 122 0 495 0.00 0.00 0 617 0.00 0.00 3.70 0 0 0 0 . 1 . 006 nuclear nobuild full . protein 25.26 13.89 0 116 37 105 4 20 98 122 0 495 0.00 0.00 0 617 0.00 0.00 3.80 0 0 0 0 . 1 . 007 nuclear nobuild full . protein 21.05 13.82 0 116 38 105 1 17 104 122 0 495 0.00 0.00 0 617 0.00 0.00 3.66 0 0 0 0 . 1 . 008 nuclear nobuild full . protein 19.47 17.17 0 116 35 105 4 16 102 122 0 495 0.00 0.00 0 617 0.00 0.00 3.63 0 0 0 0 . 1 . 009 nuclear nobuild full . protein 19.47 9.23 0 116 33 105 4 17 101 122 0 495 0.00 0.00 0 617 0.00 0.00 3.62 0 0 0 0 . 1 . 010 nuclear nobuild full . protein 20.53 16.27 0 116 30 105 5 14 103 122 0 495 0.00 0.00 0 617 0.00 0.00 3.58 0 0 0 0 . 1 stop_ save_