data_229d_residue save_MolProbity _Software.Sf_category software _Software.Sf_framecode MolProbity _Software.Entry_ID ? _Software.ID 1 _Software.Name MolProbity _Software.Version 4.0 _Software.Details . save_ save_CYRANGE _Software.Sf_category software _Software.Sf_framecode CYRANGE _Software.Entry_ID ? _Software.ID 2 _Software.Name CYRANGE _Software.Version 2.0 _Software.Details . save_ save_Structure_validation_residue _Structure_validation_residue.Sf_category structure_validation _Structure_validation_residue.Sf_framecode Structure_validation_residue _Structure_validation_residue.Entry_ID ? _Structure_validation_residue.List_ID 1 _Structure_validation_residue.PDB_accession_code 229d _Structure_validation_residue.Date_analyzed 2016-10-07 loop_ _Residue_analysis_software.Software_ID _Residue_analysis_software.Software_label _Residue_analysis_software.Method_ID _Residue_analysis_software.Method_label _Residue_analysis_software.Entry_ID _Residue_analysis_software.Structure_validation_oneline_list_ID 1 MolProbity . . ? 1 2 CYRANGE . . ? 1 stop_ loop_ _Residue_analysis.ID _Residue_analysis.PDB_model_num _Residue_analysis.Hydrogen_positions _Residue_analysis.MolProbity_flips _Residue_analysis.Cyrange_core_flag _Residue_analysis.Two_letter_chain_ID _Residue_analysis.PDB_strand_ID _Residue_analysis.PDB_residue_no _Residue_analysis.PDB_ins_code _Residue_analysis.PDB_residue_name _Residue_analysis.Assembly_ID _Residue_analysis.Entity_assembly_ID _Residue_analysis.Entity_ID _Residue_analysis.Comp_ID _Residue_analysis.Comp_index_ID _Residue_analysis.Clash_value _Residue_analysis.Clash_source_PDB_atom_name _Residue_analysis.Clash_destination_PDB_atom_name _Residue_analysis.Clash_destination_PDB_strand_ID _Residue_analysis.Clash_destination_PDB_residue_no _Residue_analysis.Clash_destination_PDB_ins_code _Residue_analysis.Clash_destination_PDB_residue_name _Residue_analysis.Cbeta_deviation_value _Residue_analysis.Rotamer_score _Residue_analysis.Rotamer_name _Residue_analysis.Ramachandran_phi _Residue_analysis.Ramachandran_psi _Residue_analysis.Ramachandran_score _Residue_analysis.Ramachandran_evaluation _Residue_analysis.Ramachandran_type _Residue_analysis.Bond_outlier_count _Residue_analysis.Worst_bond _Residue_analysis.Worst_bond_value _Residue_analysis.Worst_bond_sigma _Residue_analysis.Angle_outlier_count _Residue_analysis.Worst_angle _Residue_analysis.Worst_angle_value _Residue_analysis.Worst_angle_sigma _Residue_analysis.RNA_phosphate_perpendicular_outlier _Residue_analysis.RNA_suitness_score _Residue_analysis.RNA_suite_conformer _Residue_analysis.RNA_suite_triage _Residue_analysis.Max_b_factor _Residue_analysis.Tau_angle _Residue_analysis.Omega_dihedral _Residue_analysis.Disulfide_chi1 _Residue_analysis.Disulfide_chi2 _Residue_analysis.Disulfide_chi3 _Residue_analysis.Disulfide_ss_angle _Residue_analysis.Disulfide_ss _Residue_analysis.Disulfide_ss_angle_prime _Residue_analysis.Disulfide_chi2prime _Residue_analysis.Disulfide_chi1prime _Residue_analysis.Outlier_count_separate_geometry _Residue_analysis.Outlier_count _Residue_analysis.Entry_ID _Residue_analysis.Structure_validation_residue_list_ID . 001 nuclear orig full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.534 2.837 0 O4'-C4'-C3' 108.29 2.69 . . . . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear orig full ' A' A ' 2' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.55 4.859 5 O4'-C1'-N19 128.189 25.486 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' A' A ' 3' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.413 -3.036 0 P-O3'-C3' 123.475 3.146 . . . . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear orig full ' A' A ' 4' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.54 3.685 1 O4'-C1'-N19 114.989 8.986 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 5' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O5' 1.623 3.017 1 O4'-C1'-N19 114.449 8.311 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 6' ' ' ' DC' . . . . . 0.424 ' C5 ' ' CM1' ' A' ' 11' ' ' MG1 . . . . . . . . 0 O4'--C4' 1.408 -3.481 1 O4'-C1'-N19 115.519 9.648 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear orig full ' A' A ' 7' ' ' UMP . . . . . 0.415 H2'' ' N7 ' ' A' ' 8' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 8' ' ' ' DG' . . . . . 0.415 ' N7 ' H2'' ' A' ' 7' ' ' UMP . . . . . . . . 0 C5'--C4' 1.539 3.513 1 P-O3'-C3' 125.409 4.757 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear orig full ' A' A ' 9' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 1 O4'--C4' 1.397 -4.457 2 N19-C1'-C2' 139.49 15.806 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear orig full ' A' A ' 10' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.419 -2.468 1 O4'-C1'-N19 112.505 5.882 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 11' ' ' MG1 . . . . . 0.424 ' CM1' ' C5 ' ' A' ' 6' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 12' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.536 3.151 1 O4'-C1'-N19 112.735 6.169 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 13' ' ' UMP . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 nuclear orig full ' A' A ' 14' ' ' 5CM . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 0 0 . 1 . 001 nuclear orig full ' A' A ' 15' ' ' UMP . . . . . 0.469 " H2'" ' C8 ' ' A' ' 16' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear orig full ' A' A ' 16' ' ' ' DG' . . . . . 0.469 ' C8 ' " H2'" ' A' ' 15' ' ' UMP . . . . . . . . 0 C5'--C4' 1.541 3.793 1 O4'-C1'-N19 115.575 9.718 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear orig full ' A' A ' 17' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 P--O5' 1.627 3.433 2 O5'-C5'-C4' 119.607 6.719 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.534 2.837 0 O4'-C4'-C3' 108.29 2.69 . . . . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear build full ' A' A ' 2' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.55 4.859 5 O4'-C1'-N19 128.189 25.486 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear build full ' A' A ' 3' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.413 -3.036 0 P-O3'-C3' 123.475 3.146 . . . . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear build full ' A' A ' 4' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.54 3.685 1 O4'-C1'-N19 114.989 8.986 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 5' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O5' 1.623 3.017 1 O4'-C1'-N19 114.449 8.311 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 6' ' ' ' DC' . . . . . 0.424 ' C5 ' ' CM1' ' A' ' 11' ' ' MG1 . . . . . . . . 0 O4'--C4' 1.408 -3.481 1 O4'-C1'-N19 115.519 9.648 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear build full ' A' A ' 7' ' ' UMP . . . . . 0.587 H2'' ' N7 ' ' A' ' 8' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 8' ' ' ' DG' . . . . . 0.587 ' N7 ' H2'' ' A' ' 7' ' ' UMP . . . . . . . . 0 C5'--C4' 1.539 3.513 1 P-O3'-C3' 125.409 4.757 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear build full ' A' A ' 9' ' ' ' DA' . . . . . 0.434 H2'' ' C8 ' ' A' ' 10' ' ' ' DA' . . . . . . . . 1 O4'--C4' 1.397 -4.457 2 N19-C1'-C2' 139.49 15.806 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear build full ' A' A ' 10' ' ' ' DA' . . . . . 0.434 ' C8 ' H2'' ' A' ' 9' ' ' ' DA' . . . . . . . . 0 O4'--C4' 1.419 -2.468 1 O4'-C1'-N19 112.505 5.882 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear build full ' A' A ' 11' ' ' MG1 . . . . . 0.424 ' CM1' ' C5 ' ' A' ' 6' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 12' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.536 3.151 1 O4'-C1'-N19 112.735 6.169 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 13' ' ' UMP . . . . . 0.591 ' C6 ' H5A2 ' A' ' 14' ' ' 5CM . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 14' ' ' 5CM . . . . . 0.591 H5A2 ' C6 ' ' A' ' 13' ' ' UMP . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 15' ' ' UMP . . . . . 0.557 " H2'" ' C8 ' ' A' ' 16' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear build full ' A' A ' 16' ' ' ' DG' . . . . . 0.68 H2'' H5'' ' A' ' 17' ' ' ' DG' . . . . . . . . 0 C5'--C4' 1.541 3.793 1 O4'-C1'-N19 115.575 9.718 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear build full ' A' A ' 17' ' ' ' DG' . . . . . 0.68 H5'' H2'' ' A' ' 16' ' ' ' DG' . . . . . . . . 0 P--O5' 1.627 3.433 2 O5'-C5'-C4' 119.607 6.719 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear nobuild full ' A' A ' 1' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.534 2.837 0 O4'-C4'-C3' 108.29 2.69 . . . . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear nobuild full ' A' A ' 2' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . 1 C5'--C4' 1.55 4.859 5 O4'-C1'-N19 128.189 25.486 . . . . 0.0 . . . . . . . . . . 2 1 . 1 . 001 nuclear nobuild full ' A' A ' 3' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 O4'--C4' 1.413 -3.036 0 P-O3'-C3' 123.475 3.146 . . . . 0.0 . . . . . . . . . . 0 0 . 1 . 001 nuclear nobuild full ' A' A ' 4' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.54 3.685 1 O4'-C1'-N19 114.989 8.986 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 5' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 P--O5' 1.623 3.017 1 O4'-C1'-N19 114.449 8.311 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 6' ' ' ' DC' . . . . . 0.424 ' C5 ' ' CM1' ' A' ' 11' ' ' MG1 . . . . . . . . 0 O4'--C4' 1.408 -3.481 1 O4'-C1'-N19 115.519 9.648 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear nobuild full ' A' A ' 7' ' ' UMP . . . . . 0.587 H2'' ' N7 ' ' A' ' 8' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 8' ' ' ' DG' . . . . . 0.587 ' N7 ' H2'' ' A' ' 7' ' ' UMP . . . . . . . . 0 C5'--C4' 1.539 3.513 1 P-O3'-C3' 125.409 4.757 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear nobuild full ' A' A ' 9' ' ' ' DA' . . . . . 0.434 H2'' ' C8 ' ' A' ' 10' ' ' ' DA' . . . . . . . . 1 O4'--C4' 1.397 -4.457 2 N19-C1'-C2' 139.49 15.806 . . . . 0.0 . . . . . . . . . . 3 2 . 1 . 001 nuclear nobuild full ' A' A ' 10' ' ' ' DA' . . . . . 0.434 ' C8 ' H2'' ' A' ' 9' ' ' ' DA' . . . . . . . . 0 O4'--C4' 1.419 -2.468 1 O4'-C1'-N19 112.505 5.882 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear nobuild full ' A' A ' 11' ' ' MG1 . . . . . 0.424 ' CM1' ' C5 ' ' A' ' 6' ' ' ' DC' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 12' ' ' ' DA' . . . . . . . . . . . . . . . . . . . . 0 C5'--C4' 1.536 3.151 1 O4'-C1'-N19 112.735 6.169 . . . . 0.0 . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 13' ' ' UMP . . . . . 0.591 ' C6 ' H5A2 ' A' ' 14' ' ' 5CM . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 14' ' ' 5CM . . . . . 0.591 H5A2 ' C6 ' ' A' ' 13' ' ' UMP . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 15' ' ' UMP . . . . . 0.557 " H2'" ' C8 ' ' A' ' 16' ' ' ' DG' . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 1 . 1 . 001 nuclear nobuild full ' A' A ' 16' ' ' ' DG' . . . . . 0.68 H2'' H5'' ' A' ' 17' ' ' ' DG' . . . . . . . . 0 C5'--C4' 1.541 3.793 1 O4'-C1'-N19 115.575 9.718 . . . . 0.0 . . . . . . . . . . 2 2 . 1 . 001 nuclear nobuild full ' A' A ' 17' ' ' ' DG' . . . . . 0.68 H5'' H2'' ' A' ' 16' ' ' ' DG' . . . . . . . . 0 P--O5' 1.627 3.433 2 O5'-C5'-C4' 119.607 6.719 . . . . 0.0 . . . . . . . . . . 2 2 . 1 stop_ save_