BMRB Entry 7059

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7059

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C, and 15N Resonance Assignments of the Pyrazinamidase from Mycobacterium Tuberculosis

Deposition date:

2006-04-10

Original release date:

2006-10-02

Authors:

Son, Woo-Sung; Kim, Won-Je; Kim, Yong-Jin; Suh, Se-Won; Lee, Bong-Jin

Citation:

Citation: Son, Woo-Sung; Kim, Won-Je; Kim, Yong-Jin; Suh, Se-Won; Ikegami, Takahisa; Akutsu, Hideo; Lee, Bong-Jin. "1H, 13C and 15N Resonance Assignments of the Pyrazinamidase from Mycobacterium Tuberculosis" J. Biomol. NMR 36, 60-60 (2006).
PubMed: 17131033

Assembly members:

Assembly members:
Pyrazinamidase, polymer, 186 residues, 19604.6 Da.

Natural source:

Natural source: Common Name: Mycobacterium Tuberculosis Taxonomy ID: 1773 Superkingdom: Eubacteria Kingdom: not available Genus/species: Mycobacterium tuberculosis

Experimental source:

Experimental source: Production method: recombinant technology Vector: pET-22b(+)

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Pyrazinamidase: MRALIIVDVQNDFCEGGSLA VTGGAALARAISDYLAEAAD YHHVVATKDFHIDPGDHFSG TPDYSSSWPPHCVSGTPGAD FHPSLDTSAIEAVFYKGAYT GAYSGFEGVDENGTPLLNWL RQRGVDEVDVVGIATDHCVR QTAEDAVRNGLATRVLVDLT AGVSADTTVAALEEMRTASV ELVCSS

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	679
15N chemical shifts	178
1H chemical shifts	1110

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Pyrazinamidase	1

Entities:

Entity 1, Pyrazinamidase 186 residues - 19604.6 Da.

1

MET

ARG

ALA

LEU

ILE

VAL

ASP

VAL

GLN

2

ASN

ASP

PHE

CYS

GLU

GLY

SER

LEU

ALA

3

VAL

THR

GLY

ALA

LEU

ALA

ARG

ALA

4

ILE

SER

ASP

TYR

LEU

ALA

GLU

ALA

ASP

5

TYR

HIS

VAL

ALA

THR

LYS

ASP

PHE

6

HIS

ILE

ASP

PRO

GLY

ASP

HIS

PHE

SER

GLY

7

THR

PRO

ASP

TYR

SER

TRP

PRO

8

HIS

CYS

VAL

SER

GLY

THR

PRO

GLY

ALA

ASP

9

PHE

HIS

PRO

SER

LEU

ASP

THR

SER

ALA

ILE

10

GLU

ALA

VAL

PHE

TYR

LYS

GLY

ALA

TYR

THR

11

GLY

ALA

TYR

SER

GLY

PHE

GLU

GLY

VAL

ASP

12

GLU

ASN

GLY

THR

PRO

LEU

ASN

TRP

LEU

13

ARG

GLN

ARG

GLY

VAL

ASP

GLU

VAL

ASP

VAL

14

VAL

GLY

ILE

ALA

THR

ASP

HIS

CYS

VAL

ARG

15

GLN

THR

ALA

GLU

ASP

ALA

VAL

ARG

ASN

GLY

16

LEU

ALA

THR

ARG

VAL

LEU

VAL

ASP

LEU

THR

17

ALA

GLY

VAL

SER

ALA

ASP

THR

VAL

ALA

18

ALA

LEU

GLU

MET

ARG

THR

ALA

SER

VAL

19

GLU

LEU

VAL

CYS

SER

Samples:

sample_1: Pyrazinamidase, [U-13C; U-15N; 70%-2H], 0.8 ± 0.1 mM; DTT 10 mM; NaN3 1 mM

sample_2: Pyrazinamidase, [U-13C; U-15N], 0.8 ± 0.1 mM; DTT 10 mM; NaN3 1 mM

sample_3: Pyrazinamidase, [U-15N], 0.8 ± 0.1 mM; DTT 10 mM; NaN3 1 mM

conditions_1: pH: 6.7; temperature: 313 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H15N_HSQC	not available	not available	conditions_1
1H15N_TROSY	not available	not available	conditions_1
3D TROSY-HNCA	not available	not available	conditions_1
3D TROSY-HN(CO)CA	not available	not available	conditions_1
3D TROSY-HNCACB	not available	not available	conditions_1
3D TROSY-HN(CO)CACB	not available	not available	conditions_1
3D TROSY-HN(CA)CO	not available	not available	conditions_1
3D TROSY-HNCO	not available	not available	conditions_1
3D CC(CO)NH	not available	not available	conditions_1
3D (H)CC(CO)NH	not available	not available	conditions_1
3D HNHA	not available	not available	conditions_1
3D HBHA(CO)NH	not available	not available	conditions_1
3D 15N-edited NOESY-TROSY	not available	not available	conditions_1
3D 13C-edited NOESY-HSQC	not available	not available	conditions_1
3D 13C-edited TOCSY-HSQC	not available	not available	conditions_1
3D HCCH-COSY	not available	not available	conditions_1
3D HCCH-TOCSY	not available	not available	conditions_1

Software:

No software information available

NMR spectrometers:

Bruker Avance 600 MHz
Bruker Avance 800 MHz
Bruker Avance 500 MHz

PDB	3PL1
DBJ	BAH26342 BAL66049 BAO48146 BAQ06101 GAA45748
EMBL	CAD96922 CAL72050 CCC27128 CCC44398 CCC64640
GB	AAB37768 AAK38743 AAK46382 AAV33179 AAV33180
REF	NP_216559 NP_336568 NP_855719 WP_003410243 WP_003906725