BMRB Entry 6732

Name: The structure of human CD23 and its interactions with IgE and CD21
Published: 2005-10-18

Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR6732

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

The structure of human CD23 and its interactions with IgE and CD21

Deposition date:

2005-07-19

Original release date:

2005-10-18

Authors:

Hibbert, Richard; Teriete, Peter; McDonnell, James

Citation:

Citation: Hibbert, Richard; Teriete, Peter; Grundy, Gabrielle; Beavil, Rebecca; Reljic, Rajko; Holers, V.; Hannan, Jonathan; Sutton, Brian; Gould, Hannah; McDonnell, James. "The structure of human CD23 and its interactions with IgE and CD21" J. Exp. Med. 202, 751-760 (2005).
PubMed: 16172256

Assembly members:

Assembly members:
derCD23, polymer, 143 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
derCD23: SGFVCNTCPEKWINFQRKCY YFGKGTKQWVHARYACDDME GQLVSIHSPEEQDFLTKHAS HTGSWIGLRNLDLKGEFIWV DGSHVDYSNWAPGEPTSRSQ GEDCVMMRGSGRWNDAFCDR KLGAWVCDRLATCTPPASEG SAE

Data sets:

assigned_chemical_shifts

Data type	Count
13C chemical shifts	425
15N chemical shifts	735
1H chemical shifts	1342

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	derCD23	1

Entities:

Entity 1, derCD23 143 residues - Formula weight is not available

1

SER

GLY

PHE

VAL

CYS

ASN

THR

CYS

PRO

GLU

2

LYS

TRP

ILE

ASN

PHE

GLN

ARG

LYS

CYS

TYR

3

TYR

PHE

GLY

LYS

GLY

THR

LYS

GLN

TRP

VAL

4

HIS

ALA

ARG

TYR

ALA

CYS

ASP

MET

GLU

5

GLY

GLN

LEU

VAL

SER

ILE

HIS

SER

PRO

GLU

6

GLU

GLN

ASP

PHE

LEU

THR

LYS

HIS

ALA

SER

7

HIS

THR

GLY

SER

TRP

ILE

GLY

LEU

ARG

ASN

8

LEU

ASP

LEU

LYS

GLY

GLU

PHE

ILE

TRP

VAL

9

ASP

GLY

SER

HIS

VAL

ASP

TYR

SER

ASN

TRP

10

ALA

PRO

GLY

GLU

PRO

THR

SER

ARG

SER

GLN

11

GLY

GLU

ASP

CYS

VAL

MET

ARG

GLY

SER

12

GLY

ARG

TRP

ASN

ASP

ALA

PHE

CYS

ASP

ARG

13

LYS

LEU

GLY

ALA

TRP

VAL

CYS

ASP

ARG

LEU

14

ALA

THR

CYS

THR

PRO

ALA

SER

GLU

GLY

15

SER

ALA

GLU

Samples:

sample_1: derCD23 mM

sample_2: derCD23 300 uM

sample_3: derCD23 2.3 mM

conditions_1: ionic strength: 0.150 M; pH: 6.8; temperature: 308 K

Experiments:

Name	Sample	Sample state	Sample conditions

Software:

No software information available

BMRB	6733 6734 6735
PDB	1T8C 1T8D 2H2R 2H2T 4EZM 4G96 4G9A 4GI0 4GJ0 4GJX 4GK1 4GKO 4J6J 4J6K 4J6L 4J6M 4J6N 4J6P 4J6Q 4KI1
DBJ	BAD96927 BAG73143
EMBL	CAA28465
GB	AAA52434 AAA52435 AAH14108 AAH62591 ABM83161
REF	NP_001193948 NP_001207429 NP_001993 XP_004059934 XP_004059935
SP	P06734
AlphaFold	P06734